Limb disorders
Gene: TFAP2AEnsemblGeneIds (GRCh38): ENSG00000137203
EnsemblGeneIds (GRCh37): ENSG00000137203
OMIM: 107580, Gene2Phenotype
TFAP2A is in 10 panels
1 review
Rebecca Foulger (Genomics England curator)
Comment when marking as ready: Amber rating while awaiting further dactyly cases.Created: 16 Oct 2018, 10:59 a.m.
Added 'watchlist' tag while awaiting further cases.Created: 16 Oct 2018, 10:59 a.m.
Comment on list classification: Updated rating from Red to Amber: Confirmed DD-G2P gene for Branchiooculofacial syndrome (MIM:113620) which can present with Polydactyly and Clinodactyly. Currently insufficient cases of dactyly phenotypes for diagnostic rating (PMIDs:20358615, 19685247).Created: 16 Oct 2018, 10:58 a.m.
Added 'deletions' tag based on Syndactyly patients in PMID:19685247 with whole gene deletions.Created: 16 Oct 2018, 10:54 a.m.
Gestri et al 2009 (PMID:19685247) analyzed the TFAP2A gene in 37 patients with developmental eye defects plus variable defects associated with BOFS. A 5 year old boy with 5th finger clinodactyly (amongst other phenotypes) had a 12bp deletion resulting in the deletion of 4 amino acids (Glu233 to Arg236) in TFAP2A. Whole gene deletion was seen in a further 3 patients which all presented with Syndactyly.Created: 16 Oct 2018, 10:54 a.m.
1 BOFS patient was reported in Reiber et al 2010 (PMID:20358615) with severe Syndactyly and a c.806T>C (p.Leu269Pro) de novo missense variant in TFAP2A.Created: 16 Oct 2018, 10:52 a.m.
Comment on mode of inheritance: Monoallelic MOI supported by OMIM and DD-G2P.Created: 16 Oct 2018, 10:51 a.m.
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
- Sources
-
- Expert Review Amber
- Victorian Clinical Genetics Services
- Phenotypes
-
- Polydactyly
- Branchiooculofacial syndrome, 113620
- Clinodactyly
- Syndactyly
- Tags
- OMIM
- 107580
- Clinvar variants
- Variants in TFAP2A
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Panel promoted to version 1.0
Eleanor Williams (Genomics England Curator)Rebecca Foulger: Comment on mode of inheritance
Entity classified by Genomics England curator
Rebecca Foulger (Genomics England curator)Gene: tfap2a has been classified as Amber List (Moderate Evidence).
Added Tag
Rebecca Foulger (Genomics England curator)Tag watchlist tag was added to gene: TFAP2A.
Entity classified by Genomics England curator
Rebecca Foulger (Genomics England curator)Gene: tfap2a has been classified as Amber List (Moderate Evidence).
Added Tag
Rebecca Foulger (Genomics England curator)Tag deletions tag was added to gene: TFAP2A.
Set publications
Rebecca Foulger (Genomics England curator)Publications for gene: TFAP2A were set to
Set Phenotypes
Rebecca Foulger (Genomics England curator)Phenotypes for gene: TFAP2A were changed from Polydactyly to Polydactyly; Branchiooculofacial syndrome, 113620; Clinodactyly; Syndactyly
Set mode of inheritance
Rebecca Foulger (Genomics England curator)Mode of inheritance for gene: TFAP2A was changed from to MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Added New Source
Ellen McDonagh (Genomics England Curator)TFAP2A was added to Limb disorders panel. Sources: Victorian Clinical Genetics Services
Created
Ellen McDonagh (Genomics England Curator)TFAP2A was created by Ellen McDonagh