Neonatal cholestasis
Gene: ABCG5EnsemblGeneIds (GRCh38): ENSG00000138075
EnsemblGeneIds (GRCh37): ENSG00000138075
OMIM: 605459, Gene2Phenotype
ABCG5 is in 11 panels
2 reviews
Ellen McDonagh (Genomics England Curator)
Comment on list classification: Gene associated with Sitosterolemia which includes severely reduced Cholesterol biosynthesis. PMID: 29304564 - this gene was included in a panel of genes used to investigate patients with unexplained cholestasis. Several publications for evidence of role in biliary cholestrol secretion in mice. As the full text for this article is not available, unable to confirm whether variants were identified and validated in this gene for any of these patients. This gene is on the VCGS panel but not the King's Liver Disease panel. Could not find evidence for cases of neonatal cholestrolemia or liver failure.Created: 25 Jul 2018, 2:49 p.m.
Jane Hartley (Birmingham Women and Children's Hospital)
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
unexplained cholestasis
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Red
- Victorian Clinical Genetics Services
- Emory Genetics Laboratory
- Phenotypes
-
- Sitosterolemia 210250
- OMIM
- 605459
- Clinvar variants
- Variants in ABCG5
- Penetrance
- None
- Publications
- Panels with this gene
-
- Sitosterolaemia
- Likely inborn error of metabolism
- Cytopenia - NOT Fanconi anaemia
- Undiagnosed metabolic disorders
- Familial hypercholesterolaemia
- Intellectual disability
- Childhood onset dystonia, chorea or related movement disorder
- Bleeding and platelet disorders
- Rare anaemia
- Inherited bleeding disorders
- Neonatal cholestasis
History Filter Activity
Panel promoted to version 1.0
Sarah Leigh (Genomics England Curator)This panel has been subjected to extensive internal and external review.
Set mode of inheritance
Sarah Leigh (Genomics England Curator)Mode of inheritance for gene: ABCG5 was changed from to BIALLELIC, autosomal or pseudoautosomal
Entity classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)Gene: abcg5 has been classified as Red List (Low Evidence).
Entity classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)Gene: abcg5 has been classified as Red List (Low Evidence).
Set publications
Ellen McDonagh (Genomics England Curator)Publications for gene: ABCG5 were set to 16614371; 29304564; 16741293
Set publications
Ellen McDonagh (Genomics England Curator)Publications for gene: ABCG5 were set to 16614371; 29304564
Entity classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)Gene: abcg5 has been classified as Amber List (Moderate Evidence).
Set Phenotypes
Ellen McDonagh (Genomics England Curator)Phenotypes for gene: ABCG5 were set to Sitosterolemia 210250
Added New Source
Ellen McDonagh (Genomics England Curator)Victorian Clinical Genetics Services was added to ABCG5. Panel: Cholestasis
Added New Source
Ellen McDonagh (Genomics England Curator)ABCG5 was added to Cholestasis panel. Sources: Emory Genetics Laboratory
Created
Ellen McDonagh (Genomics England Curator)ABCG5 was created by Ellen McDonagh