Cytopenia - NOT Fanconi anaemia
Gene: CSF3REnsemblGeneIds (GRCh38): ENSG00000119535
EnsemblGeneIds (GRCh37): ENSG00000119535
OMIM: 138971, Gene2Phenotype
CSF3R is in 6 panels
5 reviews
Steve Keeney (Central Manchester Foundation Trust)
Gene rating submitted by Steve Keeney Molecular Diagnostics Centre Central Manchester NHS Foundation Trust January 2019 on behalf of North West GLH for the GMS Haematology specialist test group.Created: 18 Feb 2019, 2:55 p.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Severe congenital neutropenia; Neutropenia, severe congenital, 7, autosomal recessive, 617014
Mandy nesbitt (Healthcare Professional)
Gene rating submitted by Mandy Nesbitt Sheffield Diagnostic Genetics Service, Sheffield Children's NHS Trust January 2019 on behalf of Yorkshire and North East GLH for the GMS Haematology specialist test group.Created: 14 Feb 2019, 5:39 p.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
617014 Neutropenia, severe congenital, 7, autosomal recessive
Frances Smith (King's College Hospital)
Gene rating submitted by Frances Smith Viapath Kings College Hospital February 2019 on behalf of London South GLH for the GMS Haematology specialist test group.Created: 8 Feb 2019, 1:37 p.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
617014 Neutropenia, severe congenital, 7
Louise Daugherty (Genomics England Curator)
Initial gene list (Consensus Genes for SPEC HAEM Panels 31.01.19 North West v1 FINAL.xlsx) collated by Steve Keeney Molecular Diagnostics Centre Central Manchester NHS Foundation Trust January 2019 on behalf of North West GLH for the GMS Haematology specialist test group. Gene Symbol submitted: CSF3R; Suggested initial gene rating: Green List (high evidence); Are variants in this gene part of your current diagnostic practice? No; Mode of inheritance: BIALLELIC, autosomal or pseudoautosomal; Phenotypes: Severe congenital neutropenia;Neutropenia, severe congenital, 7, autosomal recessive 617014; PMID(s): none submittedCreated: 18 Feb 2019, 2:57 p.m.
Initial gene list (Consensus Genes for Panels_Haem_SHEFFIELD-29.01.2019.xlsx) collated by Mandy Nesbitt Sheffield Diagnostic Genetics Service, Sheffield Children's NHS Trust January 2019 on behalf of Yorkshire and North East GLH for the GMS Haematology specialist test group. Gene Symbol submitted: CSF3R; Suggested initial gene rating: Green List (high evidence); Are variants in this gene part of your current diagnostic practice? No; Mode of inheritance: BIALLELIC, autosomal or pseudoautosomal; Phenotypes: 617014 Neutropenia, severe congenital, 7, autosomal recessive; PMID(s): none submittedCreated: 14 Feb 2019, 5:40 p.m.
Initial gene list (Consensus Genes for Haem Panels 17.12.18_KCH.xlsx) collated by Frances Smith Viapath Kings College Hospital February 2019 on behalf of London South GLH for the GMS Haematology specialist test group. Gene Symbol submitted: CSF3R; Suggested intial gene rating: Green List (high evidence); Are variants in this gene part of your current diagnostic practice? No; Mode of inheritance: BIALLELIC, autosomal or pseudoautosomal; Phenotypes: 617014 Neutropenia, severe congenital, 7; PMID(s): 19620628; 12203110; 26324699Created: 8 Feb 2019, 1:43 p.m.
Initial gene list (Consensus Genes for Panels 17.12.18_Haem_WWMGLH_v3.xlxs) collated by Carl Fratter Oxford Medical Genetics Laboratories January 2019 on behalf of Wessex and the West Midlands GLH for the GMS Haematology specialist test group. Gene Symbol submitted: CSF3R; Suggested intial gene rating: Green List (high evidence); Are variants in this gene part of your current diagnostic practice? No; Mode of inheritance: BIALLELIC, autosomal or pseudoautosomal; Phenotypes: Severe congenital neutropenia;Neutropenia, severe congenital, 7, autosomal recessive, 617014; PMID(s): 9001427;26324699;24753537Created: 6 Feb 2019, 3:13 p.m.
Carl Fratter (Oxford University Hospitals NHS Trust)
Gene rating submitted by Carl Fratter Oxford Medical Genetics Laboratories January 2019 on behalf of Wessex and the West Midlands GLH for the GMS Haematology specialist test group.Created: 6 Feb 2019, 3:12 p.m.
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- North West GLH
- Yorkshire and North East GLH
- London South GLH
- NHS GMS
- Expert Review Green
- Wessex and West Midlands GLH
- Phenotypes
-
- Neutropenia, severe congenital, 7, autosomal recessive, OMIM:617014
- OMIM
- 138971
- Clinvar variants
- Variants in CSF3R
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: CSF3R were changed from Neutropenia, severe congenital, 7, autosomal recessive, 617014; 617014 Neutropenia, severe congenital, 7; 617014 Neutropenia, severe congenital, 7, autosomal recessive; Severe congenital neutropenia to Neutropenia, severe congenital, 7, autosomal recessive, OMIM:617014
Set Phenotypes
Louise Daugherty (Genomics England Curator)Added phenotypes Neutropenia, severe congenital, 7, autosomal recessive, 617014; Severe congenital neutropenia for gene: CSF3R
Added New Source
Louise Daugherty (Genomics England Curator)Source North West GLH was added to CSF3R.
Set Phenotypes
Louise Daugherty (Genomics England Curator)Added phenotypes 617014 Neutropenia, severe congenital, 7, autosomal recessive for gene: CSF3R
Added New Source
Louise Daugherty (Genomics England Curator)Source Yorkshire and North East GLH was added to CSF3R.
Set Phenotypes, Set publications
Louise Daugherty (Genomics England Curator)Added phenotypes 617014 Neutropenia, severe congenital, 7 for gene: CSF3R Publications for gene CSF3R were changed from 26324699; 24753537; 9001427 to 26324699; 12203110; 19620628
Added New Source
Louise Daugherty (Genomics England Curator)Source London South GLH was added to CSF3R.
Added New Source
Louise Daugherty (Genomics England Curator)Source NHS GMS was added to CSF3R.
Added New Source, Set mode of inheritance, Set Phenotypes, Set publications, Status Update
Louise Daugherty (Genomics England Curator)Source Expert Review Green was added to CSF3R. Mode of inheritance for gene CSF3R was changed from to BIALLELIC, autosomal or pseudoautosomal Added phenotypes Neutropenia, severe congenital, 7, autosomal recessive, 617014; Severe congenital neutropenia for gene: CSF3R Publications for gene CSF3R were changed from to 26324699; 24753537; 9001427 Rating Changed from Red List (low evidence) to Green List (high evidence)
Created, Added New Source, Set mode of inheritance
Louise Daugherty (Genomics England Curator)gene: CSF3R was added gene: CSF3R was added to Cytopenia - NOT Fanconi anaemia. Sources: Wessex and West Midlands GLH Mode of inheritance for gene: CSF3R was set to