Ehlers Danlos syndrome with a likely monogenic cause
Gene: ABCC6EnsemblGeneIds (GRCh38): ENSG00000091262
EnsemblGeneIds (GRCh37): ENSG00000091262
OMIM: 603234, Gene2Phenotype
ABCC6 is in 12 panels
3 reviews
Eleanor Williams (Genomics England Curator)
Comment on list classification: Following discussion at the GMS musculoskeletal specialist test group Webex on 2019-06-04, removing this gene from the panel as the associated PXE phenotype is beyond the scope of this panel.Created: 11 Jun 2019, 10:59 a.m.
This gene was part of an initial gene list collated by Duncan Baker, Sheffield Diagnostic Genetics Service, January 2019 on behalf of the GMS Musculoskeletal Specialist Group; Gene symbol submitted: ABCC6; Suggested initial gene rating: redCreated: 3 Apr 2019, 3:41 p.m.
Duncan Baker (Sheffield Genetics)
Following discussion with Dr G Sobey & Dr F van Dijk - rate redCreated: 3 Apr 2019, 3:44 p.m.
Genes for PXE are not required for this panelCreated: 25 Jan 2019, 8:27 a.m.
this gene has a pseudogene for exons 1-9Created: 24 Jan 2019, 2:40 p.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Pseudoxanthoma elasticum OMIM 264800
Louise Daugherty (Genomics England Curator)
Comment on publications: added publication relating to suggested digenic inheritance (with GGCX) is reported in Pseudoxanthoma elasticum- PMID: 18800149
Created: 10 Jul 2017, 2:26 p.m.
from OMIN: ABCC6 causes pseudoxanthoma elasticum (PXE; see 264800), a heritable connective tissue disorder characterized by calcification of elastic fibers in skin, arteries, and retina (PMID:10835643,10835642,10811882)Created: 10 Jul 2017, 2:17 p.m.
Details
- Mode of Inheritance
- BOTH monoallelic and biallelic, autosomal or pseudoautosomal
- Sources
-
- Expert Review Removed
- NHS GMS
- Expert list
- Radboud University Medical Center, Nijmegen
- Phenotypes
-
- Pseudoxanthoma elasticum, AR
- 264800
- Pseudoxanthoma elasticum, forme fruste, AD
- 177850
- Tags
- OMIM
- 603234
- Clinvar variants
- Variants in ABCC6
- Penetrance
- Complete
- Publications
- Panels with this gene
-
- Retinal disorders
- Rare genetic inflammatory skin disorders
- Thoracic aortic aneurysm or dissection (GMS)
- DDG2P
- Intellectual disability
- Thoracic aortic aneurysm or dissection
- Ehlers Danlos syndrome with a likely monogenic cause
- Fetal anomalies
- Familial cerebral small vessel disease
- Pseudoxanthoma elasticum
- Cerebral vascular malformations
- Generalised arterial calcification in infancy
History Filter Activity
Added Tag
Arina Puzriakova (Genomics England Curator)Tag curated_removed tag was added to gene: ABCC6.
Entity classified by Genomics England curator
Eleanor Williams (Genomics England Curator)Gene: abcc6 has been removed from the panel.
Added New Source, Status Update
Eleanor Williams (Genomics England Curator)Source NHS GMS was added to ABCC6. Rating Changed from Green List (high evidence) to Green List (high evidence)
panel promoted to version 1
Louise Daugherty (Genomics England Curator)25 July 2017 Panel reviews were assessed, and panel was revised according to reviews and further curation.
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for ABCC6 were set to Pseudoxanthoma elasticum, AR; 264800;Pseudoxanthoma elasticum, forme fruste, AD;177850
Set Mode of Inheritance
Louise Daugherty (Genomics England Curator)Mode of inheritance for ABCC6 was changed to BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Set publications
Louise Daugherty (Genomics England Curator)Publications for ABCC6 were set to 10835643; 10835642; 10811882; 18800149
Gene classified by Genomics England curator
Louise Daugherty (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set publications
Louise Daugherty (Genomics England Curator)Publications for ABCC6 were set to 10835643;10835642;10811882
Set Mode of Inheritance
Louise Daugherty (Genomics England Curator)Mode of inheritance for ABCC6 was changed to BIALLELIC, autosomal or pseudoautosomal
Added New Source
Ellen McDonagh (Genomics England Curator)ABCC6 was added to Ehlers-Danlos syndromespanel. Sources: Expert list,Radboud University Medical Center, Nijmegen
Created
Ellen McDonagh (Genomics England Curator)ABCC6 was created by ellenmcdonagh