Ehlers Danlos syndrome with a likely monogenic cause
Gene: COL6A1EnsemblGeneIds (GRCh38): ENSG00000142156
EnsemblGeneIds (GRCh37): ENSG00000142156
OMIM: 120220, Gene2Phenotype
COL6A1 is in 8 panels
5 reviews
Duncan Baker (Sheffield Genetics)
Eleanor Williams (Genomics England Curator)
This gene was part of an initial gene list collated by Duncan Baker, Sheffield Diagnostic Genetics Service, January 2019 on behalf of the GMS Musculoskeletal Specialist Group; Gene symbol submitted: COL6A1; Suggested initial gene rating: greenCreated: 3 Apr 2019, 3:41 p.m.
Angela Brady (Nhs)
Neeti Ghali (NWTRGS, Northwick Park Hospital)
Louise Daugherty (Genomics England Curator)
Gene added due to comment from Dr Anthony Vandersteen, IWK Health centre in Halifax, Nova Scotia, Canada : 'Collagen (XII) was categorised as myopathic EDS In latest classification, only a small number of families, if one was to include this, then COL6A1, COL6A2 and COL6A3 should also be included.'Created: 26 Apr 2017, 9:02 a.m.
Comment on list classification: changed status from amber to green based evidence in the literatureCreated: 26 Apr 2017, 9:01 a.m.
Comment on publications: Added publications to support gene is involved in the disorder(s) in 3 or more unrelated casesCreated: 26 Apr 2017, 9:01 a.m.
Comment on phenotypes: Bethlem Myopathy and Ullrich congenital muscular dystrophy clinically overlap with Myopathic EDSCreated: 26 Apr 2017, 9 a.m.
COL6A1 phenotype (collagen VI-related Ullrich Congenital Muscular Dystrophy and Bethlem Myopathy) clinically overlaps with myopathic EDS.Created: 25 Apr 2017, 3:37 p.m.
Comment on publications: ecent papers on EDS classification : The 2017 International Classification of the Ehlers–Danlos Syndromes. Malfait et al., 2017 (PMID:28306229) and Ehlers–Danlos Syndromes, Rare Types, Brady et al., 2017 (PMID:28306225).Created: 25 Apr 2017, 3:24 p.m.
Mode of inheritance
Unknown
Details
- Mode of Inheritance
- BOTH monoallelic and biallelic, autosomal or pseudoautosomal
- Sources
-
- NHS GMS
- Expert Review Green
- Literature
- Phenotypes
-
- Bethlem myopathy 1, OMIM:158810
- Ullrich congenital muscular dystrophy 1, OMIM:254090
- OMIM
- 120220
- Clinvar variants
- Variants in COL6A1
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: COL6A1 were changed from Bethlem myopathy 1,OMIM:158810; Ullrich congenital muscular dystrophy 1, OMIM:254090 to Bethlem myopathy 1, OMIM:158810; Ullrich congenital muscular dystrophy 1, OMIM:254090
Set Phenotypes
Ivone Leong (Genomics England Curator)Phenotypes for gene: COL6A1 were changed from Bethlem myopathy 1,158810; Ullrich congenital muscular dystrophy 1,254090; Myopathic EDS to Bethlem myopathy 1,OMIM:158810; Ullrich congenital muscular dystrophy 1, OMIM:254090
Added New Source, Status Update
Eleanor Williams (Genomics England Curator)Source NHS GMS was added to COL6A1. Rating Changed from Green List (high evidence) to Green List (high evidence)
panel promoted to version 1
Louise Daugherty (Genomics England Curator)25 July 2017 Panel reviews were assessed, and panel was revised according to reviews and further curation.
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for COL6A1 were set to Bethlem myopathy 1,158810; Ullrich congenital muscular dystrophy 1,254090; Myopathic EDS
Gene classified by Genomics England curator
Louise Daugherty (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set Mode of Inheritance
Louise Daugherty (Genomics England Curator)Mode of inheritance for COL6A1 was changed to BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Set publications
Louise Daugherty (Genomics England Curator)Publications for COL6A1 were set to 28306229; 28306225;8782832;9580662;11865138;12840783;16130093;16130093
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for COL6A1 were set to Bethlem myopathy 1,158810;Ullrich congenital muscular dystrophy 1,254090
Set publications
Louise Daugherty (Genomics England Curator)Publications for COL6A1 were set to 28306229;28306225
Added New Source
Louise Daugherty (Genomics England Curator)COL6A1 was added to Ehlers-Danlos syndromespanel. Sources: Literature
Created
Louise Daugherty (Genomics England Curator)COL6A1 was created by LouiseD