Ehlers Danlos syndrome with a likely monogenic cause
Gene: PRDM5EnsemblGeneIds (GRCh38): ENSG00000138738
EnsemblGeneIds (GRCh37): ENSG00000138738
OMIM: 614161, Gene2Phenotype
PRDM5 is in 4 panels
6 reviews
Ivone Leong (Genomics England Curator)
Comment on phenotypes: Previous phenotypes:
Brittle cornea syndrome 2, 614170;BCS;EDSVIB;Connective Tissue Disorders;Ehlers-Danlos syndrome type VIB;Brittle cornea syndromeCreated: 18 Mar 2021, 1:56 p.m. | Last Modified: 18 Mar 2021, 1:56 p.m.
Panel Version: 2.38
Duncan Baker (Sheffield Genetics)
Eleanor Williams (Genomics England Curator)
This gene was part of an initial gene list collated by Duncan Baker, Sheffield Diagnostic Genetics Service, January 2019 on behalf of the GMS Musculoskeletal Specialist Group; Gene symbol submitted: PRDM5; Suggested initial gene rating: greenCreated: 3 Apr 2019, 3:41 p.m.
Angela Brady (Nhs)
Neeti Ghali (NWTRGS, Northwick Park Hospital)
Louise Daugherty (Genomics England Curator)
Comment on list classification: Changed status from Amber to Green from Review from Dr Anthony Vandersteen, IWK Health centre in Halifax, Nova Scotia, CanadaCreated: 26 Apr 2017, 9:41 a.m.
Review from Dr Anthony Vandersteen, IWK Health centre in Halifax, Nova Scotia, Canada 'The brittle cornea syndrome is discussed in the new nosology and greatly overlaps with kyphoscoliotic EDS, so I would put PRDM5 and ZNF469 as green'Created: 26 Apr 2017, 9:41 a.m.
Comment on list classification: Awaiting expert review on whether this can be made GreenCreated: 7 Apr 2017, 2:30 p.m.
To provide a comprehensive overview of the clinical phenotype of Brittle Cornea Syndrome, a review of reported cases was undertaken that analysed 51 patients (ZNF469: n=32; PRDM5: n=32), although the the hallmarks of the condition was thin, fragile cornea, with an increased risk for spontaneous corneal rupture, other observed phenotypes such as Craniofacial involvement, Musculoskeletal system, Skin and integument, hearing and cardiovascular were observed less consistently. So currently there is no evidence of a clear genotype–phenotype correlation as all types of mutations scattered across both genes appear to cause indistinguishable clinical phenotypes (PMID:28306225)Created: 7 Apr 2017, 2:29 p.m.
Comment on publications: added publication to support there may be another gene responsible for the BCS phenotypeCreated: 7 Apr 2017, 2:28 p.m.
Brittle Cornea Syndrome (BCS) is caused by biallelic mutations in either the genes PRDM5 encoding a DNA- binding transcription factor of the PR/ SET protein family that lacks the intrinsic histon methyltransferase activity or ZNF469, encoding a zinc finger protein of unknown function . At least one family with a clinical BCS phenotype did not harbor mutations in these genes, suggesting that at least one other gene might be associated with BCS (Rohrbach et al., 2013 PMID:23680354).Created: 7 Apr 2017, 2:26 p.m.
In relation to the EDS pathogenetic scheme, PRDM5 belongs to 'Disorders of intracellular processes'. The scheme regroups EDS subtypes for which the proteins, coded by the causative genes, function within the same pathway, and which are likely to have shared pathogenic mechanisms, based on current knowledge. However, for EDS subtypes implemented in the Disorders of intracellular processes catagory (subtypes included: Spondylocheirodysplastic EDS and Brittle Cornea Syndrome), the underlying pathophysiological mechanism currently is not readily understood, and classification within this subgroup is provisionary, until further functional information becomes available (PMID:28306229).Created: 7 Apr 2017, 2:25 p.m.
Comment on publications: Comment on publications: Added from 2017 International Classification of the Ehlers–Danlos Syndromes (PMID:28306229) and The Ehlers–Danlos Syndromes, rare types (PMID:28306225)Created: 7 Apr 2017, 2:25 p.m.
Comment on phenotypes: added synonyms / phenotypes from the literatureCreated: 7 Apr 2017, 2:24 p.m.
This is a rare recessive form of EDSCreated: 30 Mar 2017, 11:22 a.m.
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- NHS GMS
- Expert Review Green
- Illumina TruGenome Clinical Sequencing Services
- Radboud University Medical Center, Nijmegen
- Expert list
- Emory Genetics Laboratory
- Phenotypes
-
- Brittle cornea syndrome 2, OMIM:614170
- OMIM
- 614161
- Clinvar variants
- Variants in PRDM5
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
Set Phenotypes
Ivone Leong (Genomics England Curator)Phenotypes for gene: PRDM5 were changed from Brittle cornea syndrome 2, 614170; BCS; EDSVIB; Connective Tissue Disorders; Ehlers-Danlos syndrome type VIB; Brittle cornea syndrome to Brittle cornea syndrome 2, OMIM:614170
Added New Source, Status Update
Eleanor Williams (Genomics England Curator)Source NHS GMS was added to PRDM5. Rating Changed from Green List (high evidence) to Green List (high evidence)
panel promoted to version 1
Louise Daugherty (Genomics England Curator)25 July 2017 Panel reviews were assessed, and panel was revised according to reviews and further curation.
Gene classified by Genomics England curator
Louise Daugherty (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set publications
Louise Daugherty (Genomics England Curator)Publications for PRDM5 were set to 28306229; 28306225;23680354
Set publications
Louise Daugherty (Genomics England Curator)Publications for PRDM5 were set to 28306229;28306225
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for PRDM5 were set to Brittle cornea syndrome 2, 614170; BCS;EDSVIB;Connective Tissue Disorders;Ehlers-Danlos syndrome type VIB;Brittle cornea syndrome
Gene classified by Genomics England curator
Louise Daugherty (Genomics England Curator)This gene has been classified as Amber List (Moderate Evidence).
Upload gene information
Louise Daugherty (Genomics England Curator)PRDM5 was added to Ehlers-Danlos syndromespanel. Sources: Radboud University Medical Center, Nijmegen,Illumina TruGenome Clinical Sequencing Services
Set Mode of Inheritance
Louise Daugherty (Genomics England Curator)Mode of inheritance for PRDM5 was changed to BIALLELIC, autosomal or pseudoautosomal
Added New Source
Ellen McDonagh (Genomics England Curator)PRDM5 was added to Ehlers-Danlos syndromespanel. Sources: Expert list,Emory Genetics Laboratory
Created
Ellen McDonagh (Genomics England Curator)PRDM5 was created by ellenmcdonagh