Ehlers Danlos syndrome with a likely monogenic cause

Gene: THBS2

Amber List (moderate evidence)

THBS2 (thrombospondin 2)
EnsemblGeneIds (GRCh38): ENSG00000186340
EnsemblGeneIds (GRCh37): ENSG00000186340
OMIM: 188061, Gene2Phenotype
THBS2 is in 2 panels

3 reviews

Duncan Baker (Sheffield Diagnostic Genetics)

Agree that there is sufficient evidence for this to be an amber gene. Needs additional families to upgrade.
Created: 22 Aug 2024, 8:20 a.m. | Last Modified: 22 Aug 2024, 8:20 a.m.
Panel Version: 3.15

Arina Puzriakova (Genomics England Curator)

Comment on list classification: Upgrading from Red to Amber as this is the rating that has been supported by specialists but additional cases required before this gene can be considered as diagnostic-grade.
Created: 27 Aug 2024, 9:11 a.m. | Last Modified: 27 Aug 2024, 9:11 a.m.
Panel Version: 3.18
Comment on list classification: New gene added by Neeti Ghali (NWTRGS). Rating Red as only a single family has been reported to date (see below) but this is a good candidate for future promotion if additional cases are identified.

- PMID: 38433265 (2024) reports on a three-generation family of Ashkenazi Jewish ancestry with a previously uncharacterised connective tissue disorder with features of EDS with prominent vascular involvement, caused by a heterozygous pathogenic variant (c.2686T>C, p.Cys896Arg) in THBS2.
Created: 7 Jun 2024, 9:28 a.m. | Last Modified: 7 Jun 2024, 9:28 a.m.
Panel Version: 3.13

Neeti Ghali (NWTRGS, Northwick Park Hospital)

I don't know

For R101, I would consider this to be 'amber' (ie low-ish evidence at present). There is only one recently (March 2024) published family but mouse work was also described in this publication. The phenotype is described as a novel form of EDS with vascular features as well as musculoskeletal (joint hypermobility, tendon rupture and joint dislocations), haematological (prolonged bleeding) and dermatological features (atrophic scarring). One patient had cerebral aneurysms and died from an abdominal aorta dissection at the age of 70 (but therefore was not genetically confirmed) and one displayed an enlarged ascending aortic arch at 50 (4.2cm). Lifestyle factors were not discussed and the two younger relatives (30s) did not have aortopathy. Electron microscopy revealed abnormally disorganised collagen fibres. The variant described is a missense (Cys to Arg in highly conserved region) and a CRISPR/Cas9 knock-in mouse demonstrated phenotypic traits correlating with those observed in human subjects (but not aortopathy). Protein has been found to be mainly expressed in large blood vessels such as aorta.
Sources: Literature
Created: 6 Jun 2024, 2:30 p.m.

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

Phenotypes
vascular phenotype; joint hypermobility, tendon rupture, joint dislocations; prolonged bleeding; atrophic scarring, aortopathy

Publications

  • https://doi.org/10.1038/s41431-024-01559-1

Mode of pathogenicity
Other

Details

Mode of Inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
Phenotypes
  • ?Ehlers-Danlos syndrome, classic-like, 3, OMIM:620865
OMIM
188061
Clinvar variants
Variants in THBS2
Penetrance
unknown
Publications
Mode of Pathogenicity
Other
Panels with this gene

History Filter Activity

27 Aug 2024, Gel status: 2

Entity classified by Genomics England curator

Arina Puzriakova (Genomics England Curator)

Gene: thbs2 has been classified as Amber List (Moderate Evidence).

27 Aug 2024, Gel status: 1

Set Phenotypes

Arina Puzriakova (Genomics England Curator)

Phenotypes for gene: THBS2 were changed from ?Ehlers-Danlos syndrome, classic-like, 3 , OMIM:620865 to ?Ehlers-Danlos syndrome, classic-like, 3, OMIM:620865

27 Aug 2024, Gel status: 1

Set Phenotypes

Arina Puzriakova (Genomics England Curator)

Phenotypes for gene: THBS2 were changed from vascular phenotype; joint hypermobility, tendon rupture, joint dislocations; prolonged bleeding; atrophic scarring, aortopathy to ?Ehlers-Danlos syndrome, classic-like, 3 , OMIM:620865

7 Jun 2024, Gel status: 1

Entity classified by Genomics England curator

Arina Puzriakova (Genomics England Curator)

Gene: thbs2 has been classified as Red List (Low Evidence).

7 Jun 2024, Gel status: 0

Set publications

Arina Puzriakova (Genomics England Curator)

Publications for gene: THBS2 were set to https://doi.org/10.1038/s41431-024-01559-1

7 Jun 2024, Gel status: 0

Entity classified by Genomics England curator

Arina Puzriakova (Genomics England Curator)

Gene: thbs2 has been removed from the panel.

6 Jun 2024, Gel status: 0

Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes, Set penetrance, Set mode of pathogenicity

Neeti Ghali (NWTRGS, Northwick Park Hospital)

gene: THBS2 was added gene: THBS2 was added to Ehlers Danlos syndrome with a likely monogenic cause. Sources: Literature Mode of inheritance for gene: THBS2 was set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted Publications for gene: THBS2 were set to https://doi.org/10.1038/s41431-024-01559-1 Phenotypes for gene: THBS2 were set to vascular phenotype; joint hypermobility, tendon rupture, joint dislocations; prolonged bleeding; atrophic scarring, aortopathy Penetrance for gene: THBS2 were set to unknown Mode of pathogenicity for gene: THBS2 was set to Other Review for gene: THBS2 was set to AMBER