Adult onset hereditary spastic paraplegia
Gene: FARS2EnsemblGeneIds (GRCh38): ENSG00000145982
EnsemblGeneIds (GRCh37): ENSG00000145982
OMIM: 611592, Gene2Phenotype
FARS2 is in 13 panels
6 reviews
Sarah Leigh (Genomics England Curator)
The rating of this gene has been updated following NHS Genomic Medicine Service approval.Created: 14 Mar 2022, 1:19 p.m. | Last Modified: 14 Mar 2022, 1:19 p.m.
Panel Version: 1.95
Arina Puzriakova (Genomics England Curator)
Review of literature did not reveal any adult onset cases - infantile and childhood-onset only
The 'Q3_21_phenotype' tag has been added to highlight that this is a childhood onset condition. Leaving the rating as Green, but with a recommendation for review at the next GMS panel update. This gene is already Green on the 'Hereditary spastic paraplegia - childhood onset v.2.18' panel.Created: 17 Aug 2021, 12:48 p.m. | Last Modified: 17 Aug 2021, 12:48 p.m.
Panel Version: 1.35
Phenotypes
Spastic paraplegia 77, autosomal recessive, OMIM:617046
Publications
Zornitza Stark (Australian Genomics)
Childhood onset.Created: 20 Sep 2020, 8:18 a.m. | Last Modified: 20 Sep 2020, 8:18 a.m.
Panel Version: 1.7
Nick Beauchamp (Sheffield Diagnostic Genetics Service)
Childhood onset.Created: 9 May 2019, 4:54 p.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Variants in this GENE are reported as part of current diagnostic practice
Louise Daugherty (Genomics England Curator)
Green gene with Amber GLH rating, Gene discussed in view of discrepant rating(s) from GLH(s). Green rating agreed at the GMS Neurology Specialist Test Group Webex on 17th May 2019.Created: 21 May 2019, 4:14 p.m.
Review and rating submitted byJames Polke (Neurogenetics Laboratory,Institute of Neurology, London), unless specified in the review comment, on behalf of London North GLH for GMS Neurology specialist test group.Created: 9 May 2019, 4:50 p.m.
James Polke (Neurogenetics Laboratory, Institute of Neurology, London)
4 unrelated cases of FARS2 variants causing autosomal recessive HSP in the literature plus functional support. . In Sheffields HSP panelCreated: 25 Apr 2019, 1:22 p.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Spastic paraplegia 77, autosomal recessive, 617046
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Amber
- Yorkshire and North East GLH
- NHS GMS
- London North GLH
- Phenotypes
-
- Spastic paraplegia 77, autosomal recessive, 617046
- OMIM
- 611592
- Clinvar variants
- Variants in FARS2
- Penetrance
- None
- Panels with this gene
-
- Adult onset neurodegenerative disorder
- Adult onset hereditary spastic paraplegia
- Possible mitochondrial disorder - nuclear genes
- Fetal anomalies
- Likely inborn error of metabolism
- Childhood onset hereditary spastic paraplegia
- Undiagnosed metabolic disorders
- Mitochondrial disorders
- Intellectual disability
- Early onset or syndromic epilepsy
- Childhood onset dystonia, chorea or related movement disorder
- Hereditary spastic paraplegia
- DDG2P
History Filter Activity
Removed Tag
Ivone Leong (Genomics England Curator)Tag Q3_21_phenotype was removed from gene: FARS2.
Added New Source, Status Update
Ivone Leong (Genomics England Curator)Source Expert Review Amber was added to FARS2. Rating Changed from Green List (high evidence) to Amber List (moderate evidence)
Added Tag
Arina Puzriakova (Genomics England Curator)Tag Q3_21_phenotype tag was added to gene: FARS2.
Added New Source
Louise Daugherty (Genomics England Curator)Source Yorkshire and North East GLH was added to FARS2.
Added New Source, Set mode of inheritance, Set Phenotypes, Status Update
Louise Daugherty (Genomics England Curator)Source Expert Review Green was added to FARS2. Mode of inheritance for gene FARS2 was changed from to BIALLELIC, autosomal or pseudoautosomal Added phenotypes Spastic paraplegia 77, autosomal recessive, 617046 for gene: FARS2 Rating Changed from Red List (low evidence) to Green List (high evidence)
Added New Source
Louise Daugherty (Genomics England Curator)Source NHS GMS was added to FARS2.
Created, Added New Source, Set mode of inheritance
Louise Daugherty (Genomics England Curator)gene: FARS2 was added gene: FARS2 was added to Hereditary spastic paraplegia - adult onset. Sources: London North GLH Mode of inheritance for gene: FARS2 was set to