Hypogonadotropic hypogonadism (GMS)

Gene: ARHGAP35

Green List (high evidence)

ARHGAP35 (Rho GTPase activating protein 35)
EnsemblGeneIds (GRCh38): ENSG00000160007
EnsemblGeneIds (GRCh37): ENSG00000160007
OMIM: 605277, Gene2Phenotype
ARHGAP35 is in 4 panels

1 review

Achchuthan Shanmugasundram (Genomics England Curator)

Green List (high evidence)

The rating of this gene has been updated to green and the mode of inheritance set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted following NHS Genomic Medicine Service approval.
Created: 6 Dec 2024, 8:12 a.m. | Last Modified: 6 Dec 2024, 8:13 a.m.
Panel Version: 3.22
Comment on list classification: There is sufficient evidence available for promoting this gene to green rating in the next GMS review.
Created: 31 Oct 2023, 2:16 p.m. | Last Modified: 31 Oct 2023, 2:16 p.m.
Panel Version: 3.9
16 patients from 13 different families were reported with idiopathic hypogonadotropic hypogonadism (9 with IHH and 7 with Kallmann syndrome (IHH + anosmia)) and with monoallelic ARHGAP35 variants. Rare protein-truncating variants and missense variants were found in the RhoGAP domain of ARHGAP35 gene.

Zebrafish modeling using gnrh3:egfp phenotype assessment showed that mutant larvae with deficient arhgap35a (predominant ARHGAP35 paralog in zebrafish brain), displayed decreased GnRH3-GFP+ neuronal area, a readout for IHH. In vitro GAP activity studies showed that 1 rare missense variant (Arg1284Trp) had decreased GAP activity.

This gene has not yet been associated with this phenotype either in OMIM or in Gene2Phenotype. However, this gene has been associated with ARHGAP35-related developmental disorder in DD panel of G2P (with 'definitive' rating).
Sources: Literature
Created: 31 Oct 2023, 2:14 p.m.

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

Phenotypes
hypogonadotropic hypogonadism, MONDO:0018555

Publications

Details

Mode of Inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • NHS GMS
  • Literature
Phenotypes
  • hypogonadotropic hypogonadism, MONDO:0018555
Tags
gene-checked
OMIM
605277
Clinvar variants
Variants in ARHGAP35
Penetrance
None
Publications
Panels with this gene

History Filter Activity

11 Dec 2024, Gel status: 3

Added Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag gene-checked tag was added to gene: ARHGAP35.

10 Dec 2024, Gel status: 3

Removed Tag, Removed Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag Q4_23_promote_green was removed from gene: ARHGAP35. Tag Q4_23_NHS_review was removed from gene: ARHGAP35.

6 Dec 2024, Gel status: 3

Added New Source, Added New Source, Status Update

Achchuthan Shanmugasundram (Genomics England Curator)

Source NHS GMS was added to ARHGAP35. Source Expert Review Green was added to ARHGAP35. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)

31 Oct 2023, Gel status: 2

Entity classified by Genomics England curator

Achchuthan Shanmugasundram (Genomics England Curator)

Gene: arhgap35 has been classified as Amber List (Moderate Evidence).

31 Oct 2023, Gel status: 1

Added Tag, Added Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag Q4_23_promote_green tag was added to gene: ARHGAP35. Tag Q4_23_NHS_review tag was added to gene: ARHGAP35.

31 Oct 2023, Gel status: 1

Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes

Achchuthan Shanmugasundram (Genomics England Curator)

gene: ARHGAP35 was added gene: ARHGAP35 was added to Hypogonadotropic hypogonadism (GMS). Sources: Literature Mode of inheritance for gene: ARHGAP35 was set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted Publications for gene: ARHGAP35 were set to 36178483 Phenotypes for gene: ARHGAP35 were set to hypogonadotropic hypogonadism, MONDO:0018555 Review for gene: ARHGAP35 was set to GREEN