Renal ciliopathies
Gene: PSKH1EnsemblGeneIds (GRCh38): ENSG00000159792
EnsemblGeneIds (GRCh37): ENSG00000159792
OMIM: 177015, Gene2Phenotype
PSKH1 is in 3 panels
1 review
Achchuthan Shanmugasundram (Genomics England Curator)
The rating of this gene has been updated to green following NHS Genomic Medicine Service approval.Created: 24 Feb 2025, 5:45 p.m. | Last Modified: 24 Feb 2025, 5:45 p.m.
Panel Version: 3.18
Comment on list classification: There is sufficient evidence (four unrelated cases and functional studies) available for the promotion of this gene to green rating in the next GMS update.Created: 18 Sep 2024, 10:58 a.m. | Last Modified: 18 Sep 2024, 10:58 a.m.
Panel Version: 3.11
PMID:39132680 reported the identification of homozygous PSKH1 variants in four consanguineous families from a cohort of 279 families with intrahepatic cholestasis. Two of the four families (families 1 and 2) had the same homozygous founder variant (p.Arg121Trp), while different homozygous variants were reported in the other two families (family 3 - p.Ile126Val & family 4 - p.Arg183Cys).
The clinical presentations of the cases are as follows:
Family 1 - One patient died at 10 months of age with cholestasis/ liver impairment and kidney impairment.
Family 2 - Three cousins with cholestasis (two with liver failure needing transplant) and kidney features (two with kidney failure, 1 with renal echogenicity).
Family 3 - Two siblings with hepatic fibrosis (one with unilateral renal agenesis).
Family 4 - Two siblings with unexplained liver cirrhosis (one needing transplant) but normal kidney function.
Patient fibroblasts displayed abnormal cilia that are long and show abnormal transport. A homozygous Pskh1 mutant mouse faithfully recapitulated the human phenotype and displayed abnormally long cilia.
This gene has not yet been associated with any relevant phenotypes in OMIM or in Gene2Phenotype.
Sources: LiteratureCreated: 18 Sep 2024, 10:55 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
hepatorenal syndrome, MONDO:0001382
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- NHS GMS
- Literature
- Phenotypes
-
- Cholestasis, progressive familial intrahepatic, 13, OMIM:620962
- OMIM
- 177015
- Clinvar variants
- Variants in PSKH1
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: PSKH1 were changed from hepatorenal syndrome, MONDO:0001382 to Cholestasis, progressive familial intrahepatic, 13, OMIM:620962
Removed Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag Q3_24_promote_green was removed from gene: PSKH1.
Added New Source, Added New Source, Status Update
Achchuthan Shanmugasundram (Genomics England Curator)Source NHS GMS was added to PSKH1. Source Expert Review Green was added to PSKH1. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Entity classified by Genomics England curator
Achchuthan Shanmugasundram (Genomics England Curator)Gene: pskh1 has been classified as Amber List (Moderate Evidence).
Entity classified by Genomics England curator
Achchuthan Shanmugasundram (Genomics England Curator)Gene: pskh1 has been classified as Amber List (Moderate Evidence).
Added Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag Q3_24_promote_green tag was added to gene: PSKH1.
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes
Achchuthan Shanmugasundram (Genomics England Curator)gene: PSKH1 was added gene: PSKH1 was added to Renal ciliopathies. Sources: Literature Mode of inheritance for gene: PSKH1 was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: PSKH1 were set to 39132680 Phenotypes for gene: PSKH1 were set to hepatorenal syndrome, MONDO:0001382 Review for gene: PSKH1 was set to GREEN