Clefting
Gene: DNMT3BEnsemblGeneIds (GRCh38): ENSG00000088305
EnsemblGeneIds (GRCh37): ENSG00000088305
OMIM: 602900, Gene2Phenotype
DNMT3B is in 7 panels
1 review
Louise Daugherty (Genomics England Curator)
Update from Clinical team. There are a large number of patients with the phenotype but insufficient evidence that clefting is a related feature. it is represented on more appropriate panels (It is a Green gene on the A- or hypo-gammaglobulinaemia v1.10 and Intellectual disability v1.151)
Created: 31 May 2017, 7:44 a.m.
Refer to clinical team for review for further discussion, unclear from the literature if there is enough evidence of clefting in ICF syndrome.Created: 29 May 2017, 11:58 a.m.
Comment on publications:Hagleitner et al. (2008) reviewed the clinical features of 45 patients (39 families, with consanguinity confirmed in 18 patients) with Immunodeficiency, centromeric instability and facial dysmorphism (ICF syndrome). Facial dysmorphism, including epicanthic folds, hypertelorism, flat nasal bridge, and low-set ears, was commonly present. However 3 patients with a mutation in DNMT3B presented with cleft palate, but it is not clear form the paper if these three patients were related.
Weemaes et al. (2013). Among 44 patients (which included those reviewed by Hagleitner et al. 2008) with a clinical diagnosis of ICF, Weemaes et al. (2013) found that 23 (52%) had mutations in the DNMT3B gene and 13 (30%) had mutations in the ZBTB24 gene. Although the phenotype was noted as being relatively homogeneous, a few patients from both groups had congenital malformations including cardiac defects, cleft lip, clinodactyly, choanal stenosis, hip dislocation, and cerebral malformations. It was noted only one patient had Cleft lip.Created: 29 May 2017, 11:52 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Immunodeficiency-centromeric instability-facial anomalies syndrome 1
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert list
- Phenotypes
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- Immunodeficiency-centromeric instability-facial anomalies syndrome 1, 267000
- OMIM
- 602900
- Clinvar variants
- Variants in DNMT3B
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
panel promoted to version 1
Louise Daugherty (Genomics England Curator)Panel reviews were assessed, and panel was revised according to reviews and further curation 31st May 2017
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for DNMT3B were set to Immunodeficiency-centromeric instability-facial anomalies syndrome 1, 267000
Set publications
Louise Daugherty (Genomics England Curator)Publications for DNMT3B were set to 17893117; 23486536
Set publications
Louise Daugherty (Genomics England Curator)Publications for DNMT3B were set to 17893117;23486536;
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for DNMT3B were set to Immunodeficiency-centromeric instability-facial anomalies syndrome 1;267000
Created
Louise Daugherty (Genomics England Curator)DNMT3B was created by LouiseD
Added New Source
Louise Daugherty (Genomics England Curator)DNMT3B was added to Cleftingpanel. Sources: Expert list