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Clefting

Gene: RSPO2

Amber List (moderate evidence)

RSPO2 (R-spondin 2)
EnsemblGeneIds (GRCh38): ENSG00000147655
EnsemblGeneIds (GRCh37): ENSG00000147655
OMIM: 610575, Gene2Phenotype
RSPO2 is in 5 panels

1 review

Achchuthan Shanmugasundram (Genomics England Curator)

Green List (high evidence)

Comment on list classification: There are four unrelated families reported with biallelic RSPO2 variants and with Tetraamelia syndrome and these patients presented with cleft lip/ palate. Hence, this gene can be promoted to green rating in the next GMS update.
Created: 3 Nov 2026, 1:31 p.m. | Last Modified: 3 Nov 2026, 1:31 p.m.
Panel Version: 7.22
PMID:29769720 (2018) reported eleven affected individuals from five different families displaying severe developmental limb defects. Four affected foetuses from a consanguineous Turkish family (family 1) presented with radial ray deficiency with humeral involvement, absence of tibiae with or without femoral deficiency, and absence of digits on the preaxial side. The seven affected foetuses from four other families (families 2-5) presented with complete absence of four limbs, lung hypo/aplasia, cleft lip/ palate and labioscrotal fold aplasia, all characteristic of Tetraamelia syndrome (TETAMS). The family with humerofemoral hypoplasia with radiotibial ray deficiency (family 1) was identified with homozygous RSPO2 missense variant (p.Arg64Cys), while the families with Tetraamelia syndrome were identified with homozygous RSPO2 nonsense variants (p.Gln70Ter in family 2 and p.Glu137Ter in family 4), homozygous RSPO2 frmeshift variant (p.Gly42val fs*49 in family 5) or biallelic 154kb deletion spanning intron 5 and exon 6 of RSPO2 (family 3).

There is also animal models and functional evidence available from PMIDs 29769720 & 32457899.

This gene has already been associated with relevant phenotypes in OMIM (MIMs #618021 & #618022) and Gene2Phenotype (with 'strong' rating on the DD panel), and these records were last accessed on 03 November 2026.
Created: 3 Nov 2026, 1:28 p.m. | Last Modified: 3 Nov 2026, 1:28 p.m.
Panel Version: 7.18

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Tetraamelia syndrome 2, OMIM:618021; tetraamelia syndrome 2, MONDO:0060732; ?Humerofemoral hypoplasia with radiotibial ray deficiency, OMIM:618022; humerofemoral hypoplasia with radiotibial ray deficiency, MONDO:0060733

Publications

Details

Mode of Inheritance
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Victorian Clinical Genetics Services
Phenotypes
  • Tetraamelia syndrome 2, OMIM:618021
  • tetraamelia syndrome 2, MONDO:0060732
  • ?Humerofemoral hypoplasia with radiotibial ray deficiency, OMIM:618022
  • humerofemoral hypoplasia with radiotibial ray deficiency, MONDO:0060733
Tags
Q4_26_promote_green
OMIM
610575
Clinvar variants
Variants in RSPO2
Penetrance
None
Publications
Panels with this gene

History Filter Activity

3 Nov 2026, Gel status: 2

Entity classified by Genomics England curator

Achchuthan Shanmugasundram (Genomics England Curator)

Gene: rspo2 has been classified as Amber List (Moderate Evidence).

3 Nov 2026, Gel status: 1

Set Phenotypes

Achchuthan Shanmugasundram (Genomics England Curator)

Phenotypes for gene: RSPO2 were changed from Cleft lip to Tetraamelia syndrome 2, OMIM:618021; tetraamelia syndrome 2, MONDO:0060732; ?Humerofemoral hypoplasia with radiotibial ray deficiency, OMIM:618022; humerofemoral hypoplasia with radiotibial ray deficiency, MONDO:0060733

3 Nov 2026, Gel status: 1

Set publications

Achchuthan Shanmugasundram (Genomics England Curator)

Publications for gene: RSPO2 were set to

3 Nov 2026, Gel status: 1

Set mode of inheritance

Achchuthan Shanmugasundram (Genomics England Curator)

Mode of inheritance for gene: RSPO2 was changed from to BIALLELIC, autosomal or pseudoautosomal

3 Nov 2026, Gel status: 1

Added Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag Q4_26_promote_green tag was added to gene: RSPO2.

13 Aug 2018, Gel status: 1

Added New Source

Ellen McDonagh (Genomics England Curator)

RSPO2 was added to Clefting panel. Sources: Victorian Clinical Genetics Services

13 Aug 2018, Gel status: 1

Created

Ellen McDonagh (Genomics England Curator)

RSPO2 was created by Ellen McDonagh