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Clefting

Gene: MED16

Amber List (moderate evidence)

MED16 (mediator complex subunit 16)
EnsemblGeneIds (GRCh38): ENSG00000175221
EnsemblGeneIds (GRCh37): ENSG00000175221
OMIM: 604062, Gene2Phenotype
MED16 is in 2 panels

1 review

Achchuthan Shanmugasundram (Genomics England Curator)

Green List (high evidence)

Comment on list classification: There is sufficient evidence (seven unrelated families) available for the promotion of this gene to green rating in the next GMS update.
Created: 7 Aug 2025, 11:17 p.m. | Last Modified: 7 Aug 2025, 11:17 p.m.
Panel Version: 6.9
PMID:40081376 (2025) reported 25 patients from 18 families with biallelic MED16 variants and multiple congenital anomalies (MCAs)-intellectual disability syndrome.

Intellectual disability, speech delay, and/or motor delay of variable severity were constant and associated with variable combinations of craniofacial defects (micro/retrognathia, cleft palate, and preauricular tags), anomalies of the extremities, and heart defects (predominantly tetralogy of Fallot). Visual impairment, deafness, and magnetic resonance imaging (MRI) abnormalities were also frequent.

There were a total of 8 predicted protein-truncating and 18 missense or in-frame duplication variants identified from these patients.

Clefting was reported in eight patients from seven different families.

This gene has been associated with relevant phenotypes in OMIM (MIM #621220), but not yet in Gene2Phenotype.
Sources: Literature
Created: 7 Aug 2025, 11:15 p.m.

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Guillouet-Gordon syndrome, OMIM:621220

Publications

Details

Mode of Inheritance
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Guillouet-Gordon syndrome, OMIM:621220
Tags
Q3_25_promote_green
OMIM
604062
Clinvar variants
Variants in MED16
Penetrance
None
Publications
Panels with this gene

History Filter Activity

7 Aug 2025, Gel status: 2

Entity classified by Genomics England curator

Achchuthan Shanmugasundram (Genomics England Curator)

Gene: med16 has been classified as Amber List (Moderate Evidence).

7 Aug 2025, Gel status: 1

Created, Added New Source, Added Tag, Set mode of inheritance, Set publications, Set Phenotypes

Achchuthan Shanmugasundram (Genomics England Curator)

gene: MED16 was added gene: MED16 was added to Clefting. Sources: Literature Q3_25_promote_green tags were added to gene: MED16. Mode of inheritance for gene: MED16 was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: MED16 were set to 40081376 Phenotypes for gene: MED16 were set to Guillouet-Gordon syndrome, OMIM:621220 Review for gene: MED16 was set to GREEN