Genes in panel

Hereditary neuropathy or pain disorder

Gene: ITPR3

Green List (high evidence)

ITPR3 (inositol 1,4,5-trisphosphate receptor type 3)
EnsemblGeneIds (GRCh38): ENSG00000096433
EnsemblGeneIds (GRCh37): ENSG00000096433
OMIM: 147267, Gene2Phenotype
ITPR3 is in 2 panels

3 reviews

Arina Puzriakova (Genomics England Curator)

Green List (high evidence)

The rating of this gene has been updated to Green and the mode of inheritance set to 'MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted' following NHS Genomic Medicine Service approval.
Created: 2 May 2024, 9:32 a.m. | Last Modified: 2 May 2024, 9:32 a.m.
Panel Version: 4.3

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

Sarah Leigh (Genomics England Curator)

Green List (high evidence)

Comment on list classification: There is enough evidence for this gene to be rated GREEN at the next major review.
Created: 20 Jun 2023, 5:20 p.m. | Last Modified: 20 Jun 2023, 5:20 p.m.
Panel Version: 3.35
Associated with relevant phenotype in OMIM, but not associated with phenotype in Gen2Phen. PMIDs 24627108 & 32949214 report three ITPR3 variants in three unrelated cases. Segregation of the NM_002224.4, c.1843G> A (p.Val615Met) variant is observed is members of a Finnish family described in PMID: 32949214.
Created: 20 Jun 2023, 5:19 p.m. | Last Modified: 20 Jun 2023, 5:19 p.m.
Panel Version: 3.34

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

Zornitza Stark (Australian Genomics)

I don't know

Two unrelated families reported: variant segregated in four affected individuals in one family and was de novo in the second family where there was a single affected person. Some evidence for dominant-negative effect.
Sources: Literature
Created: 4 Nov 2020, 2:46 a.m.

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

Phenotypes
Charcot-Marie-Tooth disease

Publications

Details

Mode of Inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Charcot-Marie-Tooth disease, demyelinating, type 1J, OMIM:620111
OMIM
147267
Clinvar variants
Variants in ITPR3
Penetrance
None
Publications
Panels with this gene

History Filter Activity

2 May 2024, Gel status: 3

Removed Tag

Arina Puzriakova (Genomics England Curator)

Tag Q3_23_promote_green was removed from gene: ITPR3.

2 May 2024, Gel status: 3

Added New Source, Added New Source, Status Update

Arina Puzriakova (Genomics England Curator)

Source NHS GMS was added to ITPR3. Source Expert Review Green was added to ITPR3. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)

20 Jun 2023, Gel status: 2

Entity classified by Genomics England curator

Sarah Leigh (Genomics England Curator)

Gene: itpr3 has been classified as Amber List (Moderate Evidence).

20 Jun 2023, Gel status: 2

Added Tag

Sarah Leigh (Genomics England Curator)

Tag Q3_23_promote_green tag was added to gene: ITPR3.

20 Jun 2023, Gel status: 2

Set Phenotypes

Sarah Leigh (Genomics England Curator)

Phenotypes for gene: ITPR3 were changed from Charcot-Marie-Tooth disease to Charcot-Marie-Tooth disease, demyelinating, type 1J, OMIM:620111

20 Jun 2023, Gel status: 2

Set publications

Sarah Leigh (Genomics England Curator)

Publications for gene: ITPR3 were set to 32949214

20 Jun 2023, Gel status: 2

Entity classified by Genomics England curator

Sarah Leigh (Genomics England Curator)

Gene: itpr3 has been classified as Amber List (Moderate Evidence).

4 Nov 2020, Gel status: 0

Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes

Zornitza Stark (Australian Genomics)

gene: ITPR3 was added gene: ITPR3 was added to Hereditary neuropathy NOT PMP22 copy number. Sources: Literature Mode of inheritance for gene: ITPR3 was set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted Publications for gene: ITPR3 were set to 32949214 Phenotypes for gene: ITPR3 were set to Charcot-Marie-Tooth disease Review for gene: ITPR3 was set to AMBER