Genes in panel

Hereditary neuropathy or pain disorder

Gene: LRP12

Amber List (moderate evidence)

LRP12 (LDL receptor related protein 12)
EnsemblGeneIds (GRCh38): ENSG00000147650
EnsemblGeneIds (GRCh37): ENSG00000147650
LRP12 is in 2 panels

3 reviews

Christopher Record (UCL Queen Square Institute of Neurology)

Green List (high evidence)

CGG repeat expansion as cause for autosomal dominant inherited neuropathy in 44 Japanese patients
STR only
Created: 14 Nov 2024, 11:21 a.m. | Last Modified: 14 Nov 2024, 11:21 a.m.
Panel Version: 6.131

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

Phenotypes
CMT2, HMN

Publications

Mode of pathogenicity
Other

Sarah Leigh (Genomics England Curator)

Red List (low evidence)

Apart from the LRP12_CGG variant, no other LRP12 variants have been associated with conditions in OMIM, G2P or Mondo.
Created: 20 Nov 2024, 10:05 a.m. | Last Modified: 20 Nov 2024, 10:05 a.m.
Panel Version: 6.139
A trinucleotide expansion LRP12_CGG variant has been reported in numerous unrelated Japanese individuals with either Amyotrophic lateral sclerosis 28, OMIM:620452 or Oculopharyngodistal myopathy 1, OMIM:164310 (PMID:39013564; 37339631; 31332380).
This STR has not been approved or verified by Genomics England Clinical Team or Rare Disease Analyst, therefore, it can not be added to PanelApp at present.
Created: 12 Aug 2024, 2:20 p.m. | Last Modified: 12 Aug 2024, 4:05 p.m.
Panel Version: 5.8

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

Alexander Rossor (UCL Institute of Neurology)

Green List (high evidence)

Trinucleotide repeat expansion, 44 patients with neuropathy in Japanese cohort
Sources: Literature
Created: 23 Jul 2024, 8:55 p.m.

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

Phenotypes
Motor axonal neuropathy

Publications

Details

Mode of Inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Amyotrophic lateral sclerosis 28, OMIM:620452
  • amyotrophic lateral sclerosis 28, MONDO:0957538
  • Oculopharyngodistal myopathy 1, OMIM:164310
  • oculopharyngodistal myopathy 1, MONDO:0020793
Tags
STR
Clinvar variants
Variants in LRP12
Penetrance
None
Publications
Panels with this gene

History Filter Activity

20 Nov 2024, Gel status: 2

Entity classified by Genomics England curator

Sarah Leigh (Genomics England Curator)

Gene: lrp12 has been classified as Amber List (Moderate Evidence).

20 Nov 2024, Gel status: 1

Entity classified by Genomics England curator

Sarah Leigh (Genomics England Curator)

Gene: lrp12 has been classified as Red List (Low Evidence).

12 Aug 2024, Gel status: 2

Entity classified by Genomics England curator

Sarah Leigh (Genomics England Curator)

Gene: lrp12 has been classified as Amber List (Moderate Evidence).

12 Aug 2024, Gel status: 1

Set publications

Sarah Leigh (Genomics England Curator)

Publications for gene: LRP12 were set to 39013564; 37339631; 31332380

12 Aug 2024, Gel status: 1

Set Phenotypes

Sarah Leigh (Genomics England Curator)

Phenotypes for gene: LRP12 were changed from Motor axonal neuropathy to Amyotrophic lateral sclerosis 28, OMIM:620452; amyotrophic lateral sclerosis 28, MONDO:0957538; Oculopharyngodistal myopathy 1, OMIM:164310; oculopharyngodistal myopathy 1, MONDO:0020793

12 Aug 2024, Gel status: 1

Set publications

Sarah Leigh (Genomics England Curator)

Publications for gene: LRP12 were set to 39013564; 37339631; 31332380

12 Aug 2024, Gel status: 1

Set publications

Sarah Leigh (Genomics England Curator)

Publications for gene: LRP12 were set to 39013564

12 Aug 2024, Gel status: 1

Added Tag

Sarah Leigh (Genomics England Curator)

Tag STR tag was added to gene: LRP12.

12 Aug 2024, Gel status: 1

Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes

Sarah Leigh (Genomics England Curator)

gene: LRP12 was added gene: LRP12 was added to Hereditary neuropathy or pain disorder. Sources: Literature Mode of inheritance for gene: LRP12 was set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted Publications for gene: LRP12 were set to 39013564 Phenotypes for gene: LRP12 were set to Motor axonal neuropathy