Genes in panel

Hereditary neuropathy or pain disorder

Gene: NOTCH2NL

Red List (low evidence)

NOTCH2NL (notch 2 N-terminal like)
EnsemblGeneIds (GRCh38): ENSG00000264343
EnsemblGeneIds (GRCh37): ENSG00000213240
NOTCH2NL is in 1 panel

3 reviews

Arina Puzriakova (Genomics England Curator)

This gene is now known as NOTCH2NLA (ENSG00000264343).

The review by Christopher Record (UCL) below relates to a different gene, NOTCH2NLC (ENSG00000286219), which cannot be added as it does not exist in the version of Ensembl currently loaded in PanelApp (v90). This issue has been recorded and an update of the reference data in PanelApp is scheduled for later this year, at which point the NOTCH2NLC gene will be added to all appropriate panels.
Created: 17 Mar 2025, 2:43 p.m. | Last Modified: 17 Mar 2025, 2:43 p.m.
Panel Version: 6.164

Sarah Leigh (Genomics England Curator)

Red List (low evidence)

NOTCH2NL was added to this panel in error. To date, NOTCH2NL variants have not been associated with any conditions in OMIM, G2P or Mondo.
Created: 20 Nov 2024, 9:53 a.m. | Last Modified: 20 Nov 2024, 9:53 a.m.
Panel Version: 6.138

Christopher Record (UCL Queen Square Institute of Neurology)

Green List (high evidence)

[NB NOTCH2NL selected from gene drop down as NOTCH2NLC not available]
NOTCH2NLC GGC repeat expansion
Reported pure CMT in 26 cases from Japan (36948577), and 7cases from Taiwan (34675106). Chinese NOTC2NLC related NIID cohort also showed peripheral neuropathy in significant proportion (37749855). Anecdotally found in family with CMT of European ancestry (unpublished).
Phenotypes included CMT2, CMTi and HMN
Sources: Literature
Created: 14 Nov 2024, 12:30 p.m.

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

Publications

Mode of pathogenicity
Other

Details

Mode of Inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
Tags
new-gene-name
Clinvar variants
Variants in NOTCH2NL
Penetrance
None
Publications
Mode of Pathogenicity
Other
Panels with this gene

History Filter Activity

17 Mar 2025, Gel status: 1

Added Tag

Arina Puzriakova (Genomics England Curator)

Tag new-gene-name tag was added to gene: NOTCH2NL.

20 Nov 2024, Gel status: 1

Entity classified by Genomics England curator

Sarah Leigh (Genomics England Curator)

Gene: notch2nl has been classified as Red List (Low Evidence).

14 Nov 2024, Gel status: 0

Created, Added New Source, Set mode of inheritance, Set publications, Set mode of pathogenicity

Christopher Record (UCL Queen Square Institute of Neurology)

gene: NOTCH2NL was added gene: NOTCH2NL was added to Hereditary neuropathy or pain disorder. Sources: Literature Mode of inheritance for gene: NOTCH2NL was set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted Publications for gene: NOTCH2NL were set to 36948577; 37749855; 34675106 Mode of pathogenicity for gene: NOTCH2NL was set to Other Review for gene: NOTCH2NL was set to GREEN