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Intellectual disability - microarray and sequencing v3.1568 PHF14 Dmitrijs Rots gene: PHF14 was added
gene: PHF14 was added to Intellectual disability. Sources: Literature,Expert list
Mode of inheritance for gene: PHF14 was set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Publications for gene: PHF14 were set to 35074918
Phenotypes for gene: PHF14 were set to Autism
Review for gene: PHF14 was set to GREEN
Added comment: Multiple individuals in the literature reported with NDD and de novo PHF14 variants + experimental findings (in 35074918).
Additional info from AutDB:"De novo missense variants in the PHF14 gene have been identified in an ASD proband from the SPARK cohort (Feliciano et al., 2019) and the Autism Sequencing Consortium cohort (Satterstrom et al., 2020), while additional rare de novo non-coding variation in this gene has also been observed in ASD probands (Sanders et al., 2015; Yuen et al., 2017). Zhou et al., 2022 reported that PHF14 forms a complex with MECP2 and TCF20; in the same report, the authors described two individuals with de novo variants in PHF14 who presented with neurodevelopmental phenotypes, including a patient with a de novo PHF14 missense variant that abolished the MECP2-PHF14-TCF20 interaction."
Sources: Literature, Expert list
Intellectual disability - microarray and sequencing v3.0 TCF20 Louise Daugherty edited their review of gene: TCF20: Changed rating: GREEN
Intellectual disability - microarray and sequencing v3.0 TCF20 Louise Daugherty Tag watchlist was removed from gene: TCF20.
Intellectual disability - microarray and sequencing v3.0 TCF20 Louise Daugherty commented on gene: TCF20: As a result of watchlist tag audit the watchlist tag was removed from TCF20 this is now a green gene with sufficient evidence/review
Intellectual disability - microarray and sequencing v2.901 TCF20 Eleanor Williams Added comment: Comment on phenotypes: Updated as phenotype added to OMIM in May 2019
Intellectual disability - microarray and sequencing v2.901 TCF20 Eleanor Williams Phenotypes for gene: TCF20 were changed from TCF20 syndrome; Intellectual disability; developmental delay to TCF20 syndrome; Intellectual disability; developmental delay; Developmental delay with variable intellectual impairment and behavioral abnormalities 618430
Intellectual disability - microarray and sequencing v2.811 TCF20 Rebecca Foulger Classified gene: TCF20 as Green List (high evidence)
Intellectual disability - microarray and sequencing v2.811 TCF20 Rebecca Foulger Added comment: Comment on list classification: Updated rating from Amber to Green following recent external review by Konstantinos Varvagiannis (Dec 2018 and Feb 2019). The Torti et al., 2019 article (PMID:30739909) describes 27 individuals from 24 families with novel TCF20 variants. All 27 individuals had developmental delay/intellectual disability (DD/ID). Together with the individual in PMID:30525188 (Snoeijen-Schouwenaars et al 2019, Supplementary Table 2) and the additional evidence listed by Konstantinos Varvagiannis, these papers provide additional cases since the Amber rating in July 2018, and support that ID is a consistent feature amongst TCF20 patients.
Intellectual disability - microarray and sequencing v2.811 TCF20 Rebecca Foulger Gene: tcf20 has been classified as Green List (High Evidence).
Intellectual disability - microarray and sequencing v2.810 TCF20 Rebecca Foulger Phenotypes for gene: TCF20 were changed from TCF20 syndrome; Intellectual disability to TCF20 syndrome; Intellectual disability; developmental delay
Intellectual disability - microarray and sequencing v2.809 TCF20 Rebecca Foulger Publications for gene: TCF20 were set to 27436265; 25533962; 27479843; 28135719
Intellectual disability - microarray and sequencing v2.651 TCF20 Konstantinos Varvagiannis edited their review of gene: TCF20: Added comment: PMID: 30739909 (Torti et al. 2019) provides information on 27 new individuals and compares with the phenotype of 17 previously reported individuals. DD/ID was an almost universal feature (27/27 or 43/44 when considering all previously published cases).; Changed publications: 30739909, 27436265, 25228304, 28135719, 27479843, 28333917, 28554332, 30525188
Intellectual disability - microarray and sequencing v2.587 TCF20 Konstantinos Varvagiannis edited their review of gene: TCF20: Added comment: One further individual investigated for mild ID and focal epilepsy was found to harbor a de novo frameshift variant [NM_005650.3:c.5430dup or p.(Ala1811Serfs*4)] in PMID: 30525188.; Changed publications: 27436265, 25228304, 28135719, 27479843, 28333917, 28554332, 30525188
Intellectual disability - microarray and sequencing v2.587 TCF20 Konstantinos Varvagiannis reviewed gene: TCF20: Rating: GREEN; Mode of pathogenicity: None; Publications: 27436265, 25228304, 28135719, 27479843, 28333917, 28554332; Phenotypes: ; Mode of inheritance: MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown; Current diagnostic: yes
Intellectual disability - microarray and sequencing v2.468 TCF20 Louise Daugherty Source Victorian Clinical Genetics Services was added to TCF20.
Intellectual disability - microarray and sequencing TCF20 Louise Daugherty commented on gene: TCF20
Intellectual disability - microarray and sequencing TCF20 Louise Daugherty edited their review of gene: TCF20
Intellectual disability - microarray and sequencing TCF20 Louise Daugherty commented on gene: TCF20
Intellectual disability - microarray and sequencing TCF20 Zornitza Stark reviewed gene: TCF20
Intellectual disability - microarray and sequencing TCF20 BRIDGE consortium edited their review of TCF20
Intellectual disability - microarray and sequencing TCF20 Louise Daugherty classified TCF20 as amber
Intellectual disability - microarray and sequencing TCF20 Louise Daugherty commented on TCF20
Intellectual disability - microarray and sequencing TCF20 BRIDGE consortium reviewed TCF20