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Skeletal dysplasia v3.5 STT3A Eleanor Williams Tag Q3_22_rating was removed from gene: STT3A.
Tag Q3_22_NHS_review was removed from gene: STT3A.
Skeletal dysplasia v3.5 STT3A Eleanor Williams changed review comment from: The rating of this gene has been updated togreenand the mode of inheritance set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted following NHS Genomic Medicine Service approval.; to: The rating of this gene has been updated to green and the mode of inheritance set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted following NHS Genomic Medicine Service approval.
Skeletal dysplasia v3.5 STT3A Eleanor Williams reviewed gene: STT3A: Rating: GREEN; Mode of pathogenicity: ; Publications: ; Phenotypes: ; Mode of inheritance:
Skeletal dysplasia v3.4 STT3A Eleanor Williams Source Expert Review Green was added to STT3A.
Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Skeletal dysplasia v2.210 STT3A Arina Puzriakova Phenotypes for gene: STT3A were changed from Short stature; skeletal defects; Intellectual disability; Speech delay; macrocephaly; dysmorphism to Congenital disorder of glycosylation, type Iw, autosomal dominant, OMIM:619714
Skeletal dysplasia v2.209 STT3A Arina Puzriakova Classified gene: STT3A as Amber List (moderate evidence)
Skeletal dysplasia v2.209 STT3A Arina Puzriakova Added comment: Comment on list classification: Congenital disorder of glycosylation due to monoallelic variants in STT3A has been identified in at least 16 patients from 9 families (PMID: 34653363). Phenotypes included skeletal abnormalities in 10/16 subjects. Overall this supports a Green gene rating with a 'monoallelic' MOI on this panel at the next GMS panel review.
Skeletal dysplasia v2.209 STT3A Arina Puzriakova Gene: stt3a has been classified as Amber List (Moderate Evidence).
Skeletal dysplasia v2.208 STT3A Arina Puzriakova Tag Q3_22_rating tag was added to gene: STT3A.
Tag Q3_22_NHS_review tag was added to gene: STT3A.
Skeletal dysplasia v2.207 STT3A Tracy Lester gene: STT3A was added
gene: STT3A was added to Skeletal dysplasia. Sources: NHS GMS
Mode of inheritance for gene: STT3A was set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Publications for gene: STT3A were set to 34653363
Phenotypes for gene: STT3A were set to Short stature; skeletal defects; Intellectual disability; Speech delay; macrocephaly; dysmorphism
Penetrance for gene: STT3A were set to unknown
Mode of pathogenicity for gene: STT3A was set to Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments
Review for gene: STT3A was set to GREEN
Added comment: A recent paper has shown that heterozygous missense variants in the active site cause a disorder of glycosylation associated with short stature and skeletal defects in a majority of individuals. The gene is already green on the ID panel for AR condition but new review has been added to change to AD as well. The recessive disorder associated with this gene in primarily neurological so this inheritance model is not relevant in the context of skeletal dysplasia
Sources: NHS GMS