Mitochondrial disorders
Gene: LIPT2EnsemblGeneIds (GRCh38): ENSG00000175536
EnsemblGeneIds (GRCh37): ENSG00000175536
OMIM: 617659, Gene2Phenotype
LIPT2 is in 8 panels
4 reviews
Zornitza Stark (Australian Genomics)
Three patients from two families reported in the literature with bi-allelic variants in this gene. Consider Amber rating.Created: 30 Aug 2018, 6:03 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Encephalopathy, neonatal severe, with lactic acidosis and brain abnormalities, MIM#617668
Publications
Variants in this GENE are reported as part of current diagnostic practice
Shamima Rahman (UCL Institute of Child Health)
Ellen McDonagh (Genomics England Curator)
Comment on list classification: Confirmed on the NHSE GMS Mitochondrial Specialist Group Meeting call on 25th February 2019 that this gene should be Green. 3 patients (2 are siblings) reported with biallelic variants in this gene and severe neonatal encephalopathy, with functional evidence supporting a mitochondrial lipoylation defect as well as this protein being in the same pathway as LIPT1.Created: 25 Feb 2019, 4:20 p.m.
Gene added during review by Carl Fratter (Oxford University Hospitals NHS Trust).Created: 13 Nov 2015, 3:10 p.m.
Carl Fratter (Oxford University Hospitals NHS Trust)
Disease association reported at SSIEM 2015 ConferenceCreated: 29 Sep 2015, 8:22 a.m.
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- Expert Review
- Phenotypes
-
- Encephalopathy, neonatal severe, with lactic acidosis and brain abnormalities, 617668
- OMIM
- 617659
- Clinvar variants
- Variants in LIPT2
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
Set Phenotypes
Ellen McDonagh (Genomics England Curator)Phenotypes for gene: LIPT2 were changed from to Encephalopathy, neonatal severe, with lactic acidosis and brain abnormalities, 617668
Set publications
Ellen McDonagh (Genomics England Curator)Publications for gene: LIPT2 were set to
Entity classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)Gene: lipt2 has been classified as Green List (High Evidence).
Approved Gene
Ellen McDonagh (Genomics England Curator)This proposed gene was validated and added to this panel
Upload gene information
Ellen McDonagh (Genomics England Curator)LIPT2 was added to All recognised syndromes and those with suggestive featurespanel. Sources: Expert Review
Added New Source
Carl Fratter (Oxford University Hospitals NHS Trust)LIPT2 was added to All recognised syndromes and those with suggestive featurespanel. Sources: Other