Severe microcephaly
Gene: NSD2EnsemblGeneIds (GRCh38): ENSG00000109685
EnsemblGeneIds (GRCh37): ENSG00000109685
OMIM: 602952, Gene2Phenotype
NSD2 is in 5 panels
4 reviews
Arina Puzriakova (Genomics England Curator)
The rating of this gene has been updated to Green and the mode of inheritance set to 'MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted' following NHS Genomic Medicine Service approval.Created: 2 May 2024, 1:14 p.m. | Last Modified: 2 May 2024, 1:14 p.m.
Panel Version: 5.4
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sarah Leigh (Genomics England Curator)
Comment on list classification: There is enough evidence for this gene to be green on this panel.Created: 5 Dec 2023, 11:44 a.m. | Last Modified: 5 Dec 2023, 11:44 a.m.
Panel Version: 4.44
Microcephaly is well recognized as a feature associated with pathogenic NSD2 variants. PMID: 33941880 reports three NSD2 variants in three unrelated cases of Rauch-Steindl syndrome (OMIM:619695), who have severe microcephaly (Occipitofrontal circumference (OFC) below >3.0 SD). Similarly, PMID: 33276791 reports a case with
OFC of 44 cm (<−3SD). Further cases are examined in the supplementary table 4 in PMID: 33941880Created: 5 Dec 2023, 11:42 a.m. | Last Modified: 5 Dec 2023, 1:48 p.m.
Panel Version: 4.44
Ivone Leong (Genomics England Curator)
Comment on list classification: New gene added by Zornitza Stark (Australian Genomics). This gene is associated with a relevant phenotype in OMIM and Gene2Phenotype. There are >3 unrelated cases associated with this gene; however, the severity of microcephaly in these cases do not satisfy our criteria for severe microcephaly. Therefore, this gene has been given an Amber rating.Created: 16 Sep 2021, 1:07 p.m. | Last Modified: 16 Sep 2021, 1:07 p.m.
Panel Version: 2.236
Zornitza Stark (Australian Genomics)
Microcephaly reported in 6 of 7 individuals with LOF variants in this gene.
Sources: Expert listCreated: 31 Aug 2020, 8:59 a.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
microcephaly; intellectual disability
Publications
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- NHS GMS
- Expert Review Green
- Phenotypes
-
- Rauch-Steindl syndrome, OMIM:619695
- Rauch-Steindl syndrome, MONDO:0859219
- OMIM
- 602952
- Clinvar variants
- Variants in NSD2
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Removed Tag
Arina Puzriakova (Genomics England Curator)Tag Q4_23_promote_green was removed from gene: NSD2.
Added New Source, Added New Source, Status Update
Arina Puzriakova (Genomics England Curator)Source Expert Review Green was added to NSD2. Source NHS GMS was added to NSD2. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Entity classified by Genomics England curator
Sarah Leigh (Genomics England Curator)Gene: nsd2 has been classified as Amber List (Moderate Evidence).
Added Tag
Sarah Leigh (Genomics England Curator)Tag Q4_23_promote_green tag was added to gene: NSD2.
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for gene: NSD2 were changed from microcephaly, MONDO:0001149 to Rauch-Steindl syndrome, OMIM:619695; Rauch-Steindl syndrome, MONDO:0859219
Set publications
Sarah Leigh (Genomics England Curator)Publications for gene: NSD2 were set to 30345613; 31171569; 29760529; 29892088
Entity classified by Genomics England curator
Ivone Leong (Genomics England Curator)Gene: nsd2 has been classified as Amber List (Moderate Evidence).
Set publications
Ivone Leong (Genomics England Curator)Publications for gene: NSD2 were set to 30345613; 31171569
Set Phenotypes
Ivone Leong (Genomics England Curator)Phenotypes for gene: NSD2 were changed from microcephaly; intellectual disability to microcephaly, MONDO:0001149
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes
Zornitza Stark (Australian Genomics)gene: NSD2 was added gene: NSD2 was added to Severe microcephaly. Sources: Expert list Mode of inheritance for gene: NSD2 was set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted Publications for gene: NSD2 were set to 30345613; 31171569 Phenotypes for gene: NSD2 were set to microcephaly; intellectual disability Review for gene: NSD2 was set to GREEN