Hereditary spastic paraplegia
Gene: KIF1CEnsemblGeneIds (GRCh38): ENSG00000129250
EnsemblGeneIds (GRCh37): ENSG00000129250
OMIM: 603060, Gene2Phenotype
KIF1C is in 9 panels
5 reviews
Arina Puzriakova (Genomics England Curator)
Comment on list classification: Upgraded from Amber to Green as there are now sufficient unrelated cases (>3) of spasticity associated with variants in this gene (updated references in publications list). KIF1C is also already Green on the GMS-equivalent HSP panels.Created: 19 Aug 2021, 2:56 p.m. | Last Modified: 20 Aug 2021, 1:28 p.m.
Panel Version: 1.247
Louise Daugherty (Genomics England Curator)
Gene to be reviewed again after the GMS Neurology specialist test group have reviewed and agreed rating of gene on the Hereditary spastic paraplegia - childhood onset panel on May 2019Created: 3 May 2019, 8:36 a.m.
Chris Buxton (North Bristol NHS Trust)
More familailes listed on OMIM (Nov 2018):
In affected members of 2 unrelated families with SPAX2, Dor et al. (2014) identified 2 different homozygous mutations in the KIF1C gene (R731X, 603060.0001 and R169W, 603060.0002). The mutations were found using a combination of homozygosity mapping and whole-exome sequencing. Functional studies were not performed.
In 2 consanguineous families with SPAX2, Novarino et al. (2014) identified homozygous mutations in the KIF1C gene: the R731X mutation previously identified by Dor et al. (2014) and a splice site mutation (603060.0003). Novarino et al. (2014) also identified a homozygous deletion of exons 14-18 of the KIF1C gene (603060.0004) in affected members of the Moroccan family with SPAX2 reported by Bouslam et al. (2007).Created: 26 Nov 2018, 4:53 p.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
cerebellar ataxia; dysarthria; variable spasticity of the lower limbs; Cognition is not affected
Publications
Alice Gardham (Genomics England)
One patient in Gel cohort found to have compound heterozygous VUS but uncertain significance. To review literature when panel next reviewedCreated: 19 Jan 2017, 11:35 a.m.
emma baple (Genomics England Curator)
Comment when marking as ready: Still only limited evidenceCreated: 10 May 2016, 11:29 a.m.
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- Expert list
- Radboud University Medical Center, Nijmegen
- Phenotypes
-
- Spastic ataxia 2, autosomal recessive, OMIM:611302
- OMIM
- 603060
- Clinvar variants
- Variants in KIF1C
- Penetrance
- Complete
- Publications
- Panels with this gene
-
- Childhood onset hereditary spastic paraplegia
- Childhood onset dystonia, chorea or related movement disorder
- Hereditary ataxia with onset in adulthood
- Ataxia and cerebellar anomalies - narrow panel
- Hereditary spastic paraplegia
- Intellectual disability
- Hereditary ataxia
- Adult onset hereditary spastic paraplegia
- Adult onset neurodegenerative disorder
History Filter Activity
Entity classified by Genomics England curator
Arina Puzriakova (Genomics England Curator)Gene: kif1c has been classified as Green List (High Evidence).
Removed Tag
Arina Puzriakova (Genomics England Curator)Tag watchlist was removed from gene: KIF1C.
Set publications
Arina Puzriakova (Genomics England Curator)Publications for gene: KIF1C were set to 24482476; 24319291; 24482476; 17273843
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: KIF1C were changed from Spastic ataxia 2,autosomal recessive to Spastic ataxia 2, autosomal recessive, OMIM:611302
Entity classified by Genomics England curator
Louise Daugherty (Genomics England Curator)Gene: kif1c has been classified as Amber List (Moderate Evidence).
Set publications
Sarah Leigh (Genomics England Curator)Publications for gene: KIF1C were set to Dor et al. (2014)
Gene classified by Genomics England curator
emma baple (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Set Mode of Inheritance
Ellen McDonagh (Genomics England Curator)Model of inheritance for gene KIF1C was changed to BIALLELIC, autosomal or pseudoautosomal
Set Mode of Inheritance
Ellen McDonagh (Genomics England Curator)Model of inheritance for gene KIF1C was changed to BIALLELIC, autosomal or pseudoautosomal
Set Mode of Inheritance
Ellen McDonagh (Genomics England Curator)Model of inheritance for gene KIF1C was changed to BIALLELIC, autosomal or pseudoautosomal
Set Mode of Inheritance
Ellen McDonagh (Genomics England Curator)Model of inheritance for gene KIF1C was changed to BIALLELIC, autosomal or pseudoautosomal
Set Mode of Inheritance
Ellen McDonagh (Genomics England Curator)Model of inheritance for gene KIF1C was changed to BIALLELIC, autosomal or pseudoautosomal
Added New Source
Ellen McDonagh (Genomics England Curator)KIF1C was added to Hereditary spastic paraplegiapanel. Sources: Radboud University Medical Center, Nijmegen,Expert list
Added New Source
Ellen McDonagh (Genomics England Curator)KIF1C was added to Hereditary spastic paraplegiapanel. Sources: Radboud University Medical Center, Nijmegen,Expert list