Insulin resistance (including lipodystrophy)
Gene: PIK3R1EnsemblGeneIds (GRCh38): ENSG00000145675
EnsemblGeneIds (GRCh37): ENSG00000145675
OMIM: 171833, Gene2Phenotype
PIK3R1 is in 19 panels
3 reviews
David Savage (IMS MRL, Uni. Cambridge)
Sarah Leigh (Genomics England Curator)
Comment when marking as ready: Associated with phenotype in OMIM and G2P. At least five variants reported in SHORT syndrome 269880, this phenotype does not include Acanthosis nigricansCreated: 12 Aug 2016, 8:18 a.m.
Comment on mode of pathogenicity: LOF probably is responsible for this phenotypeCreated: 12 Aug 2016, 8:14 a.m.
Comment on phenotypes: Also associated with Agammaglobulinemia 7, autosomal recessive 615214 and Immunodeficiency 36 616005Created: 12 Aug 2016, 6:33 a.m.
Robert Semple (University of Cambridge)
Around 50% of patients have the p.Arg649Trp mutation. Nearly all others are located in the C terminal SH2 domain, unlike those mutations causing immunodeficiency, suggesting that the pathogenic mechanism is not simple loss of functionCreated: 12 Oct 2015, 8:53 a.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Mode of pathogenicity
Other
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Green
- UKGTN
- Phenotypes
-
- SHORT syndrome 269880
- OMIM
- 171833
- Clinvar variants
- Variants in PIK3R1
- Penetrance
- Complete
- Publications
- Mode of Pathogenicity
- Other - please provide details in the comments
- Panels with this gene
-
- Primary immunodeficiency or monogenic inflammatory bowel disease
- DDG2P
- Insulin resistance (including lipodystrophy)
- Intellectual disability
- Corneal abnormalities
- Monogenic short stature
- COVID-19 research
- Familial diabetes
- Segmental overgrowth disorders - Deep sequencing
- Respiratory ciliopathies including non-CF bronchiectasis
- Lipodystrophy - childhood onset
- IUGR and IGF abnormalities
- Mosaic skin disorders - deep sequencing
- Fetal anomalies
- Gastrointestinal epithelial barrier disorders
- Skeletal dysplasia
- Infantile enterocolitis & monogenic inflammatory bowel disease
- Diabetes with additional phenotypes suggestive of a monogenic aetiology
- Monogenic diabetes
History Filter Activity
panel promoted to version 1
Sarah Leigh (Genomics England Curator)Promoted to version 1 12/08/2016
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set mode of pathogenicity
Sarah Leigh (Genomics England Curator)Mode of pathogenicity for PIK3R1 was changed to Other - please provide details in the comments
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Upload gene information
Sarah Leigh (Genomics England Curator)PIK3R1 was added to Insulin resistance (including lipodystrophy)panel. Sources: UKGTN
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for PIK3R1 were set to SHORT syndrome 269880
Set publications
Sarah Leigh (Genomics England Curator)Publications for PIK3R1 were set to 23810382; 23810379; 23810378
Added New Source
Robert Semple (University of Cambridge)PIK3R1 was added to Insulin resistance (including lipodystrophy) panel. Sources: Literature