Optic neuropathy
Gene: SNF8EnsemblGeneIds (GRCh38): ENSG00000159210
EnsemblGeneIds (GRCh37): ENSG00000159210
OMIM: 610904, Gene2Phenotype
SNF8 is in 5 panels
1 review
Achchuthan Shanmugasundram (Genomics England Curator)
Comment on list classification: There are two unrelated cases reported with optic atrophy and hence this gene should be rated amber with current evidence.Created: 13 Mar 2024, 6:22 a.m. | Last Modified: 13 Mar 2024, 6:22 a.m.
Panel Version: 4.24
PMID:38423010 reported nine individuals from six families presenting with a spectrum of neurodevelopmental/ neurodegenerative features caused by biallelic variants in SNF8.
The phenotypic spectrum included four individuals with severe developmental and epileptic encephalopathy with leukoencephalopathy and early death in three of those cases. Two individuals died too young to develop epilepsy. A second cohort shows a milder phenotype with intellectual disability, childhood-onset optic atrophy, or ataxia. All mildly affected individuals shared the same hypomorphic variant, c.304G>A (p.Val102Ile) as compound heterozygous. Three of the patients (from two families) with the milder phenotype also have optic atrophy.
Functional studies using fibroblasts derived from patients and zebrafish model showed loss of function as the disease mechanism.
This gene has not yet been associated with any phenotypes either in OMIM or in Gene2Phenotype.
Sources: LiteratureCreated: 13 Mar 2024, 6:20 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
neurodevelopmental disorder, MONDO:0700092; optic atrophy, MONDO:0003608
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Amber
- Literature
- Phenotypes
-
- neurodevelopmental disorder, MONDO:0700092
- optic atrophy, MONDO:0003608
- OMIM
- 610904
- Clinvar variants
- Variants in SNF8
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Entity classified by Genomics England curator
Achchuthan Shanmugasundram (Genomics England Curator)Gene: snf8 has been classified as Amber List (Moderate Evidence).
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes
Achchuthan Shanmugasundram (Genomics England Curator)gene: SNF8 was added gene: SNF8 was added to Optic neuropathy. Sources: Literature Mode of inheritance for gene: SNF8 was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: SNF8 were set to 38423010 Phenotypes for gene: SNF8 were set to neurodevelopmental disorder, MONDO:0700092; optic atrophy, MONDO:0003608 Review for gene: SNF8 was set to AMBER