Pulmonary arterial hypertension
Gene: SMAD4EnsemblGeneIds (GRCh38): ENSG00000141646
EnsemblGeneIds (GRCh37): ENSG00000141646
OMIM: 600993, Gene2Phenotype
SMAD4 is in 23 panels
2 reviews
Louise Daugherty (Genomics England Curator)
Comment on phenotypes: added PAHCreated: 1 Oct 2018, 1:38 p.m.
PMID: 29650961 (2018) further question the validity of CAV1, SMAD1 and SMAD4 causing PAH. No pathogenic coding variants in CAV1, SMAD1 or SMAD4 were identified. However it was noted that the participants with causative variants reported in these genes might represent private mutations in in very rare families.Created: 16 Apr 2018, 11:59 a.m.
PMID: 26387786 Mutations in the genes encoding the downstream signalling intermediaries for bone morphogenetic protein receptors, the Smad proteins have been reported in some patients with PAH. Of these, the SMAD1 and SMAD4 defects have been described as variants of unknown significance (VUS) due to in vitro luciferase SMAD responsive elements reporter assays demonstrating an unclear impact on the canonical pathways (PMID:21898662). However, these analyses did not investigate SMAD-independent pathways, implicated in disease pathogenesis, leaving open the possibility that the identified variants may deleteriously affect other BMP related systems. PAH associations are based on one paper 21898662 (2011) a patient was identified with a putative splice site mutation in SMAD4 which resulted in moderate transcript loss due to compromised splicing efficiency.
Created: 21 Jun 2017, 11:12 a.m.
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
- Sources
-
- Expert list
- Literature
- Phenotypes
-
- Idiopathic pulmonary arterial hypertension
- IPAH
- Heritable pulmonary arterial hypertension
- HPAH
- Pulmonary arterial hypertension
- Juvenile polyposis/hereditary hemorrhagic telangiectasia syndrome, 175050
- OMIM
- 600993
- Clinvar variants
- Variants in SMAD4
- Penetrance
- Complete
- Publications
- Panels with this gene
-
- Vascular skin disorders
- Thoracic aortic aneurysm or dissection (GMS)
- Pulmonary arterial hypertension
- Bleeding and platelet disorders
- DDG2P
- Clefting
- Cerebral vascular malformations
- Colorectal cancer pertinent cancer susceptibility
- Adult solid tumours for rare disease
- GI tract tumours
- Childhood solid tumours
- Adult solid tumours cancer susceptibility
- Thoracic aortic aneurysm or dissection
- Structural eye disease
- Arthrogryposis
- Inherited bleeding disorders
- Ehlers Danlos syndrome with a likely monogenic cause
- Skeletal dysplasia
- Inherited polyposis and early onset colorectal cancer - germline testing
- Fetal anomalies
- Hereditary haemorrhagic telangiectasia
- Childhood solid tumours cancer susceptibility
- Intellectual disability
History Filter Activity
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for gene: SMAD4 were changed from Idiopathic pulmonary arterial hypertension; IPAH; Heritable pulmonary arterial hypertension; HPAH; Pulmonary arterial hypertension; Juvenile polyposis/hereditary hemorrhagic telangiectasia syndrome, 175050, PAH to Idiopathic pulmonary arterial hypertension; IPAH; Heritable pulmonary arterial hypertension; HPAH; Pulmonary arterial hypertension; Juvenile polyposis/hereditary hemorrhagic telangiectasia syndrome, 175050
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for gene: SMAD4 were changed from Idiopathic pulmonary arterial hypertension; IPAH; Heritable pulmonary arterial hypertension; HPAH; Pulmonary arterial hypertension; Juvenile polyposis/hereditary hemorrhagic telangiectasia syndrome, 175050 to Idiopathic pulmonary arterial hypertension; IPAH; Heritable pulmonary arterial hypertension; HPAH; Pulmonary arterial hypertension; Juvenile polyposis/hereditary hemorrhagic telangiectasia syndrome, 175050, PAH
Set publications
Louise Daugherty (Genomics England Curator)Publications for SMAD4 were set to 21898662; 24355637; 26387786; 29650961
panel promoted to version 1
Louise Daugherty (Genomics England Curator)Panel reviews were assessed, and panel was revised according to reviews and further in-house curation.
Upload gene information
Louise Daugherty (Genomics England Curator)SMAD4 was added to Pulmonary arterial hypertensionpanel. Sources: Expert list
Set publications
Louise Daugherty (Genomics England Curator)Publications for SMAD4 were set to 21898662; 24355637; 26387786
Set publications
Louise Daugherty (Genomics England Curator)Publications for SMAD4 were set to 21898662; 24355637; 263877862;26387786
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for SMAD4 were set to Idiopathic pulmonary arterial hypertension; IPAH; Heritable pulmonary arterial hypertension; HPAH; Pulmonary arterial hypertension; Juvenile polyposis/hereditary hemorrhagic telangiectasia syndrome, 175050
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for SMAD4 were set to diopathic pulmonary arterial hypertension; IPAH; Heritable pulmonary arterial hypertension; HPAH; Pulmonary arterial hypertension;Juvenile polyposis/hereditary hemorrhagic telangiectasia syndrome, 175050
Added New Source
Louise Daugherty (Genomics England Curator)SMAD4 was added to Pulmonary arterial hypertensionpanel. Sources: Literature
Created
Louise Daugherty (Genomics England Curator)SMAD4 was created by LouiseD