Congenital myopathy

Gene: MT-TK

Red List (low evidence)

MT-TK (mitochondrially encoded tRNA lysine)
EnsemblGeneIds (GRCh38): ENSG00000210156
EnsemblGeneIds (GRCh37): ENSG00000210156
OMIM: 590060, Gene2Phenotype
MT-TK is in 11 panels

2 reviews

Achchuthan Shanmugasundram (Genomics England Curator)

Red List (low evidence)

After NHS Genomic Medicine Service consideration, the rating of this gene has been updated to red. GLH review concluded that mitochondrial myopathies are not good fit for this panel. R300 Possible mitochondrial disorder - whole mitochondrial genome sequencing would be the more appropriate test.
Created: 11 Dec 2025, 5:32 p.m. | Last Modified: 11 Dec 2025, 5:32 p.m.
Panel Version: 6.43
Comment on list classification: As reviewed by Katherine Schon, myopathy is one of the clinical presentations of MERFF syndrome caused by m.8344A>G variant in MT-TK gene. However, it should be noted that the onset of myopathic features is not during infancy or first few years of life in the reported patients. Hence, expert review is sought from the Genomic Medicine Service on upgrading this gene to green rating on this panel.
Created: 27 Jun 2025, 9:20 a.m. | Last Modified: 27 Jun 2025, 9:20 a.m.
Panel Version: 6.16
As per MitoPhen database (https://www.mitophen.org) there are >30 patients reported with m.8344A>G variant in MT-TK gene and with myopathy as one of the presentations. However, it appears that myopathic features had a later onset even in patients that had onset of other phenotypes of myoclonus epilepsy and ragged-red fibers (MERRF) in infancy/ early childhood.

PMID:1463006 - Three different families reported with MERRF and m.8344A>G variant. The probands had the first onset of symptoms at 0.5, 5 and 9 years respectively. However, the reports of muscle weakness were reported later (starting from the ages of 10, 21 and 17 years in there three probands).

PMID:8228033 - Two siblings were reported with MERRF and m.8344A>G variant. Although both siblings complained of fatigue since early childhood, muscle weakness was only reported much later.
Created: 27 Jun 2025, 9:12 a.m. | Last Modified: 27 Jun 2025, 9:12 a.m.
Panel Version: 6.13

Mode of inheritance
MITOCHONDRIAL

Phenotypes
MERRF syndrome, MONDO:0010790; inborn mitochondrial myopathy, MONDO:0009637

Publications

Katherine Schon (University of Cambridge)

Green List (high evidence)

Myopathy is a recognised part of the phenotype in MERRF (m.8344A>G variant).
Created: 24 Jun 2025, 10:53 a.m. | Last Modified: 24 Jun 2025, 10:53 a.m.
Panel Version: 6.10

Mode of inheritance
MITOCHONDRIAL

Mode of pathogenicity
Other

Details

Mode of Inheritance
MITOCHONDRIAL
Sources
  • NHS GMS
  • Expert Review Red
  • Literature
Phenotypes
  • MERRF syndrome, MONDO:0010790
  • inborn mitochondrial myopathy, MONDO:0009637
Tags
locus-type-rna-transfer
OMIM
590060
Clinvar variants
Variants in MT-TK
Penetrance
None
Publications
Mode of Pathogenicity
Other
Panels with this gene

History Filter Activity

11 Dec 2025, Gel status: 1

Removed Tag, Removed Tag, Removed Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag Q2_25_ promote_green was removed from gene: MT-TK. Tag Q2_25_expert_review was removed from gene: MT-TK. Tag Q2_25_ NHS_review was removed from gene: MT-TK.

11 Dec 2025, Gel status: 1

Added New Source, Added New Source, Status Update

Achchuthan Shanmugasundram (Genomics England Curator)

Source Expert Review Red was added to MT-TK. Source NHS GMS was added to MT-TK. Rating Changed from Amber List (moderate evidence) to Red List (low evidence)

29 Jun 2025, Gel status: 2

Added Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag locus-type-rna-transfer tag was added to gene: MT-TK.

27 Jun 2025, Gel status: 2

Entity classified by Genomics England curator

Achchuthan Shanmugasundram (Genomics England Curator)

Gene: mt-tk has been classified as Amber List (Moderate Evidence).

27 Jun 2025, Gel status: 1

Set publications

Achchuthan Shanmugasundram (Genomics England Curator)

Publications for gene: MT-TK were set to

27 Jun 2025, Gel status: 1

Set Phenotypes

Achchuthan Shanmugasundram (Genomics England Curator)

Phenotypes for gene: MT-TK were changed from to MERRF syndrome, MONDO:0010790; inborn mitochondrial myopathy, MONDO:0009637

27 Jun 2025, Gel status: 1

Added Tag, Added Tag, Added Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag Q2_25_ promote_green tag was added to gene: MT-TK. Tag Q2_25_expert_review tag was added to gene: MT-TK. Tag Q2_25_ NHS_review tag was added to gene: MT-TK.

24 Jun 2025, Gel status: 1

Created, Added New Source, Set mode of inheritance, Set mode of pathogenicity

Achchuthan Shanmugasundram (Genomics England Curator)

gene: MT-TK was added gene: MT-TK was added to Congenital myopathy. Sources: Literature Mode of inheritance for gene gene: MT-TK was set to MITOCHONDRIAL Mode of pathogenicity for gene: MT-TK was set to Other