Bilateral congenital or childhood onset cataracts
Gene: GFEREnsemblGeneIds (GRCh38): ENSG00000127554
EnsemblGeneIds (GRCh37): ENSG00000127554
OMIM: 600924, Gene2Phenotype
GFER is in 12 panels
4 reviews
Ivone Leong (Genomics England Curator)
The rating of this gene has been updated following NHS Genomic Medicine Service approval.Created: 8 Mar 2022, 9:09 a.m. | Last Modified: 8 Mar 2022, 9:09 a.m.
Panel Version: 2.98
Comment on list classification: This gene is associated with a relevant phenotype in OMIM and Gene2Phenotype. There is enough evidence to promote this gene from Red to Green. This gene should be made Green at the next review.Created: 16 Dec 2020, 11:17 a.m. | Last Modified: 16 Dec 2020, 11:17 a.m.
Panel Version: 2.36
Zornitza Stark (Australian Genomics)
8 individuals from 4 families reported.Created: 8 Jul 2020, 7:39 a.m. | Last Modified: 8 Jul 2020, 7:39 a.m.
Panel Version: 2.6
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Myopathy, mitochondrial progressive, with congenital cataract, hearing loss, and developmental delay MIM#613076
Publications
Sarah Waller (Manchester Centre for Genomic Medicine)
Mutation found in only 1 family. Functional analysis demonstrated pathogenic mechanism (Ceh-Pavia et al (2014) Biochem J 464:449-459).Created: 2 Jun 2016, 1:20 p.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Myopathy, mitochondrial progressive, with congenital cataract, hearing loss, and developmental delay, 613076
Publications
- Di Fonzo et al (2009) Am J Hum Genet 84:594-604
Variants in this GENE are reported as part of current diagnostic practice
Ellen McDonagh (Genomics England Curator)
Comment on list classification: Demoted to red due to only one family report.Created: 3 Jun 2016, 7:55 a.m.
Not on the Manchester congenital cataracts gene panel. Is a possible DD gene for MITOCHONDRIAL PROGRESSIVE MYOPATHY WITH CONGENITAL CATARACT HEARING LOSS AND DEVELOPMENTAL DELAY. One variant reported in OMIM identified in 3 children from consanguineous Moroccan parents.Created: 29 Apr 2016, 11:49 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- Radboud University Medical Center, Nijmegen
- Phenotypes
-
- Myopathy, mitochondrial progressive, with congenital cataract and developmental delay, OMIM:613076
- OMIM
- 600924
- Clinvar variants
- Variants in GFER
- Penetrance
- Complete
- Publications
- Panels with this gene
-
- Childhood onset dystonia, chorea or related movement disorder
- Likely inborn error of metabolism
- Mitochondrial disorders
- Possible mitochondrial disorder - nuclear genes
- DDG2P
- Congenital myopathy
- Structural eye disease
- Arthrogryposis
- Monogenic hearing loss
- Intellectual disability
- Undiagnosed metabolic disorders
- Bilateral congenital or childhood onset cataracts
History Filter Activity
Removed Tag
Ivone Leong (Genomics England Curator)Tag for-review was removed from gene: GFER.
Added New Source, Status Update
Ivone Leong (Genomics England Curator)Source Expert Review Green was added to GFER. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Entity classified by Genomics England curator
Ivone Leong (Genomics England Curator)Gene: gfer has been classified as Amber List (Moderate Evidence).
Set Phenotypes
Ivone Leong (Genomics England Curator)Phenotypes for gene: GFER were changed from Myopathy, mitochondrial progressive, with congenital cataract, hearing loss, and developmental delay, OMIM:613076 to Myopathy, mitochondrial progressive, with congenital cataract and developmental delay, OMIM:613076
Added Tag
Ivone Leong (Genomics England Curator)Tag for-review tag was added to gene: GFER.
Set Phenotypes
Ivone Leong (Genomics England Curator)Phenotypes for gene: GFER were changed from Myopathy, mitochondrial progressive, with congenital cataract, hearing loss, and developmental delay, 613076 to Myopathy, mitochondrial progressive, with congenital cataract, hearing loss, and developmental delay, OMIM:613076
Set publications
Ivone Leong (Genomics England Curator)Publications for gene: GFER were set to Di Fonzo et al (2009) Am J Hum Genet 84:594-604
Gene classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Set Mode of Inheritance
Ellen McDonagh (Genomics England Curator)Mode of inheritance for GFER was changed to BIALLELIC, autosomal or pseudoautosomal
Gene classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Set publications
Ellen McDonagh (Genomics England Curator)Publications for GFER were set to Di Fonzo et al (2009) Am J Hum Genet 84:594-604
Gene classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)This gene has been classified as Amber List (Moderate Evidence).
Added New Source
GEL ()GFER was added to Cataractspanel. Sources: Radboud University Medical Center, Nijmegen