CAKUT
Gene: HAAOEnsemblGeneIds (GRCh38): ENSG00000162882
EnsemblGeneIds (GRCh37): ENSG00000162882
OMIM: 604521, Gene2Phenotype
HAAO is in 9 panels
1 review
Ellen McDonagh (Genomics England Curator)
Comment on list classification: Confirmed with the clinical team that this gene has enough evidence to be green.Created: 5 Sep 2017, 8:54 a.m.
Two unrelated cases are reported in a new publication PMID: 28792876. One case in a consanguineous Lenanese family (Family B) was found to be homozygous for a stop codon, both unaffected parents and 3 unaffected siblings were heterozygous. The second case in a consanguineous family from Iraq (Family A), was homozygous for a c.483dupT variants resulting in a stop codon. Both unaffected parents and 4 unaffected siblings were heterozygous. Metabolites upstream of HAAO in the kynurenine pathway were higher in patients A and B than unaffected family members. Downstream, levels of NAD+ in plasma from the patients were a third to a quarter the levels of unaffected family members. In vitro assays demonstrated that the stop codon variants result in reduced enzyme activity. Knockout mouse model embryos on a niacin-free diet developed similar defects to the patients. Added the 'treatable' tag to indicate that naicin supplementation during gestation prevented the malformations in the null mice.Created: 14 Aug 2017, 12:11 p.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Multiple congenital malformations; VACTERL-like phenotype
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- Literature
- Phenotypes
-
- Multiple congenital malformations
- VACTERL-like phenotype
- Tags
- OMIM
- 604521
- Clinvar variants
- Variants in HAAO
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
Gene classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Gene classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)This gene has been classified as Amber List (Moderate Evidence).
Created
Ellen McDonagh (Genomics England Curator)HAAO was created by ellenmcdonagh
Added New Source
Ellen McDonagh (Genomics England Curator)HAAO was added to CAKUTpanel. Sources: Literature