Infantile nystagmus
Gene: LYSTEnsemblGeneIds (GRCh38): ENSG00000143669
EnsemblGeneIds (GRCh37): ENSG00000143669
OMIM: 606897, Gene2Phenotype
LYST is in 24 panels
2 reviews
Ellen McDonagh (Genomics England Curator)
Comment on list classification: Gene added from expert list, and rated green, diagnostic grade by the expert. Associated with Chediak-Higashi syndrome in OMIM, and is a confirmed DD gene for Chediak-Higashi Syndrome. 3 cases reported in OMIM where oculocutaneous albinism or partial oculocutaneous albinism is described, multiple different variants reported in cases with Chediak-Higashi syndrome.Created: 7 Sep 2016, 3:40 p.m.
Penny Clouston (Oxford)
Phenotypes
oculo-cutaneous albinism
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- Phenotypes
-
- oculo-cutaneous albinism
- Chediak-Higashi syndrome
- optic neuropathy with progressive vision loss
- OMIM
- 606897
- Clinvar variants
- Variants in LYST
- Penetrance
- Complete
- Publications
- Panels with this gene
-
- Ocular and oculo-cutaneous albinism
- Parkinson Disease and Complex Parkinsonism
- Cytopenia - NOT Fanconi anaemia
- Adult onset neurodegenerative disorder
- COVID-19 research
- Infantile nystagmus
- Vici Syndrome and other autophagy disorders
- Hereditary neuropathy
- Optic neuropathy
- Intellectual disability
- Hereditary neuropathy or pain disorder
- Adult onset hereditary spastic paraplegia
- Hereditary spastic paraplegia
- DDG2P
- Primary immunodeficiency or monogenic inflammatory bowel disease
- Early onset or syndromic epilepsy
- Albinism or congenital nystagmus
- Pigmentary skin disorders
- Adult onset dystonia, chorea or related movement disorder
- Inherited bleeding disorders
- Childhood onset hereditary spastic paraplegia
- Fetal anomalies
- Rare genetic inflammatory skin disorders
- Bleeding and platelet disorders
History Filter Activity
panel promoted to version 1
Ellen McDonagh (Genomics England Curator)21/Dec/2016: panel revised according to expert review, addition of green genes from the Ocular and oculo-cutaneous albinism (Version 1.1) gene panel and further curation.
Gene classified by Genomics England curator
Alice Gardham (Genomics England)This gene has been classified as Green List (High Evidence).
Set publications
Alice Gardham (Genomics England)Publications for LYST were set to 8896560; 9215679; 10482950; 20301751 - Chediak-Higashi syndrome (CHS) is characterized by partial oculocutaneous albinism (OCA), immunodeficiency, and a mild bleeding tendency.
Created
Ellen McDonagh (Genomics England Curator)LYST was created by ellenmcdonagh
Added New Source
Ellen McDonagh (Genomics England Curator)LYST was added to Infantile nystagmuspanel. Sources: Expert Review Green