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Arthrogryposis

Gene: AGRN

Amber List (moderate evidence)

AGRN (agrin)
EnsemblGeneIds (GRCh38): ENSG00000188157
EnsemblGeneIds (GRCh37): ENSG00000188157
OMIM: 103320, Gene2Phenotype
AGRN is in 3 panels

2 reviews

Arina Puzriakova (Genomics England Curator)

Comment on list classification: Upgrading from Red to Amber as two families have now been identified with FADS which presents with multiple joint contractures (PMID: 31730230; 39807604)
Created: 29 Aug 2025, 11:32 a.m. | Last Modified: 29 Aug 2025, 11:32 a.m.
Panel Version: 9.7
PMID: 39807604 (2025) - biallelic null variants in AGRN leading to a fetal akinesia deformation sequence (FADS) identified in a second family affecting three pregnancies. WES revealed a maternally inherited heterozygous variant c.952+1_952+3del and split-read analysis identified a paternally inherited heterozygous 41.33 kb deletion, encompassing exons 1 and 2 of AGRN.
Created: 29 Aug 2025, 11:29 a.m. | Last Modified: 29 Aug 2025, 11:29 a.m.
Panel Version: 9.4
Copied from review by Rhiannon Mellis (GOSH) on the Fetal anomalies panel, 30 Sep 2020:

Geremek et al. 2019 (PMID: 31730230): First case report associating AGRN with lethal fetal phenotype (FADS) (including contractures of fingers and all four limbs) - unlike previous reported postnatal cases, the fetus had null variants on both alleles (a frameshift in trans with a 148kb deletion), which the authors suggest as a possible explanation for the severe phenotype.
Created: 21 Jan 2021, 1:28 p.m. | Last Modified: 21 Jan 2021, 1:28 p.m.
Panel Version: 3.51

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Fetal akinesia deformation sequence, MONDO:0008824

Publications

Alice Gardham (Genomics England)

Red List (low evidence)

Not congenital-no arthrogryposis
Created: 4 Jan 2017, 1:39 p.m.

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Myasthenic syndrome, congenital, 8, with pre- and postsynaptic defects 615120

Details

Mode of Inheritance
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Radboud University Medical Center, Nijmegen
  • Expert list
Phenotypes
  • Fetal akinesia deformation sequence, MONDO:0008824
OMIM
103320
Clinvar variants
Variants in AGRN
Penetrance
Complete
Publications
Panels with this gene

History Filter Activity

29 Aug 2025, Gel status: 2

Entity classified by Genomics England curator

Arina Puzriakova (Genomics England Curator)

Gene: agrn has been classified as Amber List (Moderate Evidence).

29 Aug 2025, Gel status: 1

Set publications

Arina Puzriakova (Genomics England Curator)

Publications for gene: AGRN were set to 31730230

29 Aug 2025, Gel status: 1

Set Phenotypes

Arina Puzriakova (Genomics England Curator)

Phenotypes for gene: AGRN were changed from Fetal akinesia deformation sequence (FADS) to Fetal akinesia deformation sequence, MONDO:0008824

21 Jan 2021, Gel status: 1

Set Phenotypes

Arina Puzriakova (Genomics England Curator)

Phenotypes for gene: AGRN were changed from Myasthenic syndrome, congenital, 8, with pre- and postsynaptic defects, OMIM:615120 to Fetal akinesia deformation sequence (FADS)

21 Jan 2021, Gel status: 1

Set publications

Arina Puzriakova (Genomics England Curator)

Publications for gene: AGRN were set to

21 Jan 2021, Gel status: 1

Set Phenotypes

Arina Puzriakova (Genomics England Curator)

Phenotypes for gene: AGRN were changed from Myasthenia, limb-girdle, familial, 254300 to Myasthenic syndrome, congenital, 8, with pre- and postsynaptic defects, OMIM:615120

21 Jan 2021, Gel status: 1

Set mode of inheritance

Arina Puzriakova (Genomics England Curator)

Mode of inheritance for gene: AGRN was changed from to BIALLELIC, autosomal or pseudoautosomal

16 Jan 2017, Gel status: 1

panel promoted to version 2

Ellen McDonagh (Genomics England Curator)

16th Jan 2016: This gene panel was extensively revised with the addition of 101 green genes and review by Alice Gardham. Due to this extensive change to the panel, the decision was made to promote it to the next major version, version 2.

4 Jan 2017, Gel status: 1

Gene classified by Genomics England curator

Alice Gardham (Genomics England)

This gene has been classified as Red List (Low Evidence).

21 Dec 2016, Gel status: 1

Added New Source

Ellen McDonagh (Genomics England Curator)

AGRN was added to Arthrogryposispanel. Source: Radboud University Medical Center, Nijmegen

21 Dec 2016, Gel status: 0

Added New Source

Ellen McDonagh (Genomics England Curator)

AGRN was added to Arthrogryposispanel. Sources: Expert list

21 Dec 2016, Gel status: 0

Created

Ellen McDonagh (Genomics England Curator)

AGRN was created by ellenmcdonagh