Arthrogryposis
Gene: ATP1A2EnsemblGeneIds (GRCh38): ENSG00000018625
EnsemblGeneIds (GRCh37): ENSG00000018625
OMIM: 182340, Gene2Phenotype
ATP1A2 is in 19 panels
3 reviews
Sarah Leigh (Genomics England Curator)
The rating of this gene has been updated following NHS Genomic Medicine Service approvalCreated: 3 Mar 2022, 3:49 p.m. | Last Modified: 3 Mar 2022, 3:49 p.m.
Panel Version: 3.150
Arina Puzriakova (Genomics England Curator)
Comment on list classification: Two additional unrelated families reported by Chatron et al PMID: 31608932 with affected fetuses described as having polymicrogyria, microcephaly, polyhydramnios and FADS. Two individuals from one family also presented hand contractures and rocker-bottom feet, bringing the total to 3 unrelated families with relevant phenotype.
As number of cases now reaches threshold for inclusion as diagnostic-grade, ATP1A2 should be promoted to Green at the next GMS panel update (added 'for-review' tag)Created: 18 Jan 2021, 10:59 a.m. | Last Modified: 18 Jan 2021, 10:59 a.m.
Panel Version: 3.44
Rebecca Foulger (Genomics England curator)
Comment on list classification: Rated as Amber: 2 unrelated families in PMID:30690204 with arthrogryposis amongst their postnatal phenotypes. Further cases required for diagnostic rating.Created: 7 May 2020, 4:10 p.m. | Last Modified: 7 May 2020, 4:10 p.m.
Panel Version: 3.11
Added to panel based on PMID:30690204 (Monteiro et al., 2020) who describe 3 newborns from 2 unrelated families who died neontally, presenting in utero with fetal hydrops, seizures and polyhydramnios. At birth they had arthrogryposis, microcephaly, malformations of cortical development, dysmorphic features and severe respiratory insufficiency. Biallelic LOF variants in ATP1A2 were found upon WES.
Sources: LiteratureCreated: 7 May 2020, 4:09 p.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
arthrogryposis, microcephaly, malformations of cortical development, dysmorphic features and severe respiratory insufficiency
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- Literature
- Phenotypes
-
- arthrogryposis, microcephaly, malformations of cortical development, dysmorphic features and severe respiratory insufficiency
- OMIM
- 182340
- Clinvar variants
- Variants in ATP1A2
- Penetrance
- None
- Publications
- Panels with this gene
-
- Monogenic hearing loss
- Childhood onset dystonia, chorea or related movement disorder
- Severe microcephaly
- Adult onset neurodegenerative disorder
- Skeletal muscle channelopathy
- Fetal hydrops
- Arthrogryposis
- Paroxysmal central nervous system disorders
- Malformations of cortical development
- Early onset or syndromic epilepsy
- Hereditary ataxia with onset in adulthood
- Early onset dystonia
- Intellectual disability
- Adult onset dystonia, chorea or related movement disorder
- Fetal anomalies
- DDG2P
- Brain channelopathy
- Skeletal Muscle Channelopathies
- Familial cerebral small vessel disease
History Filter Activity
Removed Tag
Sarah Leigh (Genomics England Curator)Tag for-review was removed from gene: ATP1A2.
Added New Source, Status Update
Sarah Leigh (Genomics England Curator)Source Expert Review Green was added to ATP1A2. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Entity classified by Genomics England curator
Arina Puzriakova (Genomics England Curator)Gene: atp1a2 has been classified as Amber List (Moderate Evidence).
Set publications
Arina Puzriakova (Genomics England Curator)Publications for gene: ATP1A2 were set to 30690204
Added Tag
Arina Puzriakova (Genomics England Curator)Tag for-review tag was added to gene: ATP1A2.
Entity classified by Genomics England curator
Rebecca Foulger (Genomics England curator)Gene: atp1a2 has been classified as Amber List (Moderate Evidence).
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes
Rebecca Foulger (Genomics England curator)gene: ATP1A2 was added gene: ATP1A2 was added to Arthrogryposis. Sources: Literature Mode of inheritance for gene: ATP1A2 was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: ATP1A2 were set to 30690204 Phenotypes for gene: ATP1A2 were set to arthrogryposis, microcephaly, malformations of cortical development, dysmorphic features and severe respiratory insufficiency