- ABCD1 0
- ACSL4 0
- AFF2 0
- AGA 0
- AP1S2 0
- ARHGEF6 0
- ARHGEF9 0
- ARX 0
- ATP7A 0
- ATRX 0
- BCOR 0
- BRWD3 0
- CASK 0
- CDKL5 0
- CLIC2 0
- CNTNAP2 0
- CUL4B 0
- DCX 0
- DKC1 0
- DLG3 0
- DMD 0
- DYNC1H1 0
- EHMT1 0
- FGD1 0
- FLNA 0
- FMR1 0
- FOXP1 0
- FTSJ1 0
- GDI1 0
- GK 0
- GPC3 0
- GRIA3 0
- GRIN2B 0
- HCCS 0
- HCFC1 0
- HPRT1 0
- HSD17B10 0
- HUWE1 0
- IDS 0
- IL1RAPL1 0
- IQSEC2 0
- KANSL1 0
- KCNJ10 0
- KDM5C 0
- KIF1A 0
- L1CAM 0
- LAMP2 0
- MAN1B1 0
- MAOA 0
- MBD5 0
- MECP2 0
- MED12 0
- MEF2C 0
- MID1 0
- NAA10 0
- NDP 0
- NDUFA1 0
- NHS 0
- NRXN1 0
- NSDHL 0
- NSUN2 0
- OCRL 0
- OFD1 0
- OPHN1 0
- OTC 0
- PAK3 0
- PAX6 0
- PCDH19 0
- PDHA1 0
- PGK1 0
- PHF6 1
- PHF8 0
- PLP1 0
- PORCN 0
- PQBP1 0
- PRPS1 0
- PRSS12 0
- RAB39B 0
- RBM10 0
- RPS6KA3 0
- SHROOM4 0
- SLC16A2 0
- SLC9A6 0
- SMS 0
- SOX3 0
- SYN1 0
- SYP 0
- TCF4 0
- TIMM8A 0
- TRAPPC9 0
- TSPAN7 0
- UBE2A 0
- UBE3A 0
- UPF3B 0
- VPS13B 0
- WDR62 0
- ZDHHC9 0
- ZEB2 0
- ZNF41 0
- ZNF674 0
- ZNF711 0
- ZNF81 0
- ATP6AP2 0
- B3GLCT 1
- CLN8 0
- FTO 0
- IGBP1 0
- KCNK9 0
- LARGE1 1
- MBTPS2 0
- PIGO 0
- PIGV 0
- POMGNT1 0
- POMT1 0
- POMT2 0
- SCN1A 0
- ABCC9 0
- ABCD4 0
- ABHD5 0
- ACAD9 0
- ACBD6 0
- ACE2 0
- ACIN1 0
- ACOT9 0
- ACOX1 0
- ACSF3 0
- ACTB 0
- ACTG1 0
- ACTL6A 0
- ACTL6B 0
- ACVR1 0
- ACY1 0
- ADAR 0
- ADGRG1 0
- ADGRG4 0
- ADK 0
- ADRA2B 0
- ADSL 0
- AGO1 0
- AGPAT2 0
- AGTR2 0
- AHCY 0
- AHI1 0
- AIFM1 0
- AIMP1 0
- AK1 0
- AKAP17A 0
- AKAP4 0
- AKR1C2 0
- AKT3 0
- ALDH18A1 0
- ALDH3A2 0
- ALDH4A1 0
- ALDH5A1 0
- ALG1 0
- ALG12 0
- ALG13 0
- ALG3 0
- ALG6 0
- ALG8 0
- ALX1 0
- ALX4 0
- AMT 0
- ANK3 0
- ANKH 0
- ANKRD11 0
- ANO10 0
- AP3B1 0
- AP4B1 0
- AP4E1 0
- AP4M1 0
- AP4S1 0
- APTX 0
- ARFGEF2 0
- ARG1 0
- ARHGAP36 0
- ARHGAP6 0
- ARHGEF4 0
- ARID1A 0
- ARID1B 0
- ARID2 0
- ARIH1 0
- ARL13B 0
- ARL14EP 0
- ARL6 0
- ARSF 0
- ASB12 0
- ASCC3 0
- ASCL1 0
- ASH1L 0
- ASL 0
- ASMT 0
- ASMTL 0
- ASPA 0
- ASPM 0
- ASXL1 0
- ATIC 0
- ATM 0
- ATP1A2 0
- ATP2A2 0
- ATP2B3 0
- ATP6V0A2 0
- ATR 0
- ATXN3L 0
- AUH 0
- AVPR2 0
- AWAT2 0
- B4GALT1 0
- B4GALT7 0
- BBS1 0
- BBS10 0
- BBS12 0
- BBS2 0
- BBS4 0
- BBS5 0
- BBS7 0
- BBS9 0
- BCKDHA 0
- BCKDHB 0
- BCORL1 0
- BCS1L 0
- BDP1 0
- BLM 0
- BMP15 0
- BRAF 0
- BSCL2 0
- BTD 0
- BTK 0
- BUB1B 0
- C12orf57 0
- C5orf42 0
- CA2 0
- CA8 0
- CACNA1C 0
- CACNA1F 0
- CACNA1G 0
- CACNG2 0
- CAMK2A 0
- CAMK2G 0
- CAP1 0
- CAPN10 0
- CASP2 0
- CBL 0
- CBS 0
- CC2D1A 0
- CC2D2A 0
- CCBE1 0
- CCDC22 0
- CCDC78 0
- CCNA2 0
- CCNB3 0
- CD99 0
- CDH15 0
- CDK16 0
- CDK5RAP2 0
- CDK8 0
- CDON 0
- CENPJ 0
- CEP135 0
- CEP152 0
- CEP290 0
- CEP41 0
- CFAP47 0
- CFP 0
- CHD2 0
- CHD7 0
- CHL1 0
- CLCN4 0
- CLCN5 0
- CLCNKB 0
- CLN3 0
- CLN5 0
- CLN6 0
- CMC4 0
- CNKSR1 0
- CNKSR2 0
- COG1 0
- COG7 0
- COG8 0
- COL4A1 0
- COL4A2 0
- COL4A3BP 1
- COL4A6 0
- COLEC11 0
- COQ2 0
- COQ5 0
- COQ8A 1
- COX10 0
- COX15 0
- CPS1 0
- CPXCR1 0
- CRBN 0
- CREBBP 0
- CRLF2 0
- CSF2RA 0
- CSTF2 0
- CTDP1 0
- CTNNB1 0
- CTPS2 0
- CTSA 0
- CTSD 0
- CTTNBP2 0
- CUX2 0
- CXorf58 0
- CYB5R3 0
- CYP7B1 0
- D2HGDH 0
- DARS2 0
- DBT 0
- DCAF17 0
- DCHS2 0
- DDHD2 0
- DDOST 0
- DDX3X 0
- DDX53 0
- DEAF1 0
- DGKH 0
- DHCR24 0
- DHCR7 0
- DHFR 0
- DHRSX 0
- DHTKD1 0
- DHX30 0
- DIAPH2 0
- DIP2B 0
- DLD 0
- DLG1 0
- DLG2 0
- DLG4 0
- DMPK 0
- DNAJC19 0
- DNMT3B 0
- DOCK11 0
- DOCK8 0
- DPAGT1 0
- DPF1 0
- DPF2 0
- DPF3 0
- DPM1 0
- DPYD 0
- DST 0
- DYM 0
- DYRK1A 0
- EEF1A2 0
- EEF1B2 0
- EFTUD2 0
- EIF2AK3 0
- EIF2S3 0
- ELK1 0
- ELOVL4 0
- ELP2 0
- EMX2 0
- ENOX2 0
- ENTPD1 0
- EP300 0
- EPB41L1 0
- EPPK1 0
- ERCC2 0
- ERCC3 0
- ERCC5 0
- ERCC6 0
- ERCC8 0
- ERLIN2 0
- ESCO2 0
- ESX1 0
- ETHE1 0
- EXOSC3 0
- FAAH2 0
- FAM120C 0
- FAM126A 0
- FAM47B 0
- FAM58A 1
- FANCB 0
- FASN 0
- FBN1 0
- FGFR1 0
- FGFR2 0
- FGFR3 0
- FH 0
- FKBPL 0
- FKRP 0
- FKTN 0
- FOXG1 0
- FOXP2 0
- FRAS1 0
- FRMPD4 0
- FRY 0
- FTL 0
- FUCA1 0
- GAB3 0
- GABRQ 0
- GAD1 0
- GALE 0
- GALT 0
- GAMT 0
- GATAD2B 0
- GATM 0
- GCDH 0
- GCH1 0
- GCSH 0
- GFAP 0
- GFER 0
- GJB1 0
- GJC2 0
- GLB1 0
- GLDC 0
- GLI2 0
- GLI3 0
- GLRA2 0
- GM2A 0
- GMPPB 0
- GNAS 0
- GNPAT 0
- GNS 0
- GON4L 0
- GPHN 0
- GPRASP1 0
- GRB14 0
- GRIA1 0
- GRIA2 0
- GRIK2 0
- GRIN1 0
- GRIN2A 0
- GRM1 0
- GSPT2 0
- GSS 0
- GTF2H5 0
- GTPBP8 0
- GUSB 0
- HAUS7 0
- HAX1 0
- HDAC4 0
- HDAC6 0
- HDAC8 0
- HESX1 0
- HEXA 0
- HEXB 0
- HGSNAT 0
- HIST1H4B 1
- HIST3H3 1
- HIVEP2 0
- HLCS 0
- HNRNPU 0
- HOXA1 0
- HPD 0
- HRAS 0
- HS6ST2 0
- HSPD1 0
- IDUA 0
- IER3IP1 0
- IFNAR2 0
- IGF1 0
- IGSF1 0
- IKBKG 0
- IL3RA 0
- INF2 0
- INPP4A 0
- INPP5E 0
- INTS6L 1
- IRAK1 0
- ISPD 1
- ITGA4 0
- ITIH6 0
- JAM3 0
- KANK1 0
- KAT6B 0
- KCNC3 0
- KCND1 0
- KCNH1 0
- KCNJ11 0
- KCNK12 0
- KCNQ2 0
- KCNQ3 0
- KCNT1 0
- KCTD7 0
- KDM1A 0
- KDM5A 0
- KDM6A 0
- KDM6B 0
- KIF11 0
- KIF1BP 1
- KIF26B 0
- KIF4A 0
- KIF5C 0
- KIF7 0
- KIRREL3 0
- KLF8 0
- KLHL15 0
- KLHL21 0
- KLHL34 0
- KLHL4 0
- KMT2C 0
- KMT2D 0
- KRAS 0
- L2HGDH 0
- LAMA1 0
- LAMA2 0
- LAMC3 0
- LARP7 0
- LAS1L 0
- LHFPL3 0
- LIG4 0
- LIMK1 0
- LINS1 1
- LRP1 0
- LRP2 0
- LRPPRC 0
- LRRK1 0
- MAGEA11 0
- MAGEB1 0
- MAGEB10 0
- MAGEB2 0
- MAGEC1 0
- MAGEC3 0
- MAGED1 0
- MAGEE2 0
- MAGIX 0
- MAGT1 0
- MAN2B1 0
- MANBA 0
- MAOB 0
- MAP2K1 0
- MAP2K2 0
- MAP3K15 0
- MAP7D3 0
- MAT1A 0
- MBNL3 0
- MCCC1 0
- MCCC2 0
- MCOLN1 0
- MCPH1 0
- MED17 0
- MED23 0
- MGAT2 0
- MGAT5B 0
- MIB1 0
- MKKS 0
- MLC1 0
- MLH1 0
- MLYCD 0
- MMAA 0
- MMAB 0
- MMACHC 0
- MMADHC 0
- MOCS1 0
- MOCS2 0
- MORC4 0
- MPDU1 0
- MPLKIP 0
- MRPS22 0
- MSL3 0
- MTF1 0
- MTM1 0
- MTMR1 0
- MTMR8 0
- MTR 0
- MTRR 0
- MUT 1
- MVK 0
- MXRA5 0
- MYCN 0
- MYO1D 0
- MYO1G 0
- MYO5A 0
- MYT1L 0
- NAGA 0
- NAGLU 0
- NALCN 0
- NDE1 0
- NDST1 0
- NDUFA11 0
- NDUFA12 0
- NDUFS1 0
- NDUFS2 0
- NDUFS3 0
- NDUFS4 0
- NDUFS7 0
- NDUFS8 0
- NDUFV1 0
- NECAB2 0
- NECTIN1 1
- NEU1 0
- NEXMIF 1
- NF1 0
- NFIX 0
- NIPBL 0
- NKAP 0
- NKX2-1 0
- NLGN3 0
- NLGN4X 0
- NLRP3 0
- NPHP1 0
- NR1I3 0
- NRAS 0
- NRK 0
- NRXN2 0
- NSD1 0
- NTM 0
- NTRK1 0
- NXF4 1
- NXF5 0
- OCLN 1
- ODF2L 0
- OGT 0
- OR5M1 0
- ORC1 0
- OXCT1 0
- P2RY4 0
- P2RY8 0
- PABPC5 0
- PACS1 0
- PAFAH1B1 0
- PAH 0
- PANK2 0
- PARP1 0
- PASD1 0
- PAX8 0
- PBRM1 0
- PC 0
- PCDH10 0
- PCNT 0
- PDSS1 0
- PDSS2 0
- PECR 0
- PEPD 0
- PEX1 0
- PEX10 0
- PEX11B 0
- PEX12 0
- PEX13 0
- PEX16 0
- PEX19 0
- PEX2 0
- PEX26 0
- PEX3 0
- PEX5 0
- PEX6 0
- PEX7 0
- PGAP2 0
- PGRMC1 0
- PHACTR1 0
- PHF10 0
- PHGDH 0
- PHIP 0
- PHKA1 0
- PIGL 0
- PIGN 0
- PIK3C3 0
- PIK3R2 0
- PIN4 0
- PJA1 0
- PLA2G6 0
- PLCB1 0
- PLCXD1 0
- PLXNB3 0
- PMM2 0
- PNKP 0
- PNP 0
- POC1A 0
- POLA1 0
- POLR3A 0
- POLR3B 0
- PPOX 0
- PPP2R5D 0
- PPT1 0
- PRDX4 0
- PRICKLE3 0
- PRMT9 0
- PRODH 0
- PROX2 0
- PRRG1 0
- PRRG3 0
- PRRT2 0
- PSAP 0
- PSMA7 0
- PSMD10 0
- PTCH1 0
- PTCHD1 0
- PTEN 0
- PTPN11 0
- PTPN21 0
- PUDP 1
- PUS1 0
- PYCR1 0
- RAB18 0
- RAB27A 0
- RAB3GAP1 0
- RAB3GAP2 0
- RAB40AL 0
- RABL6 0
- RAD21 0
- RAF1 0
- RAI1 0
- RALGDS 0
- RAPGEF1 0
- RARS2 0
- RBM28 0
- RELN 0
- RENBP 0
- RFT1 0
- RGN 0
- RGS7 0
- RIT1 0
- RLIM 0
- RMND1 0
- RNASEH2A 0
- RNASEH2B 0
- RNASEH2C 0
- RNASET2 0
- ROGDI 0
- RPGR 0
- RPGRIP1L 0
- RPL10 0
- RTL9 1
- SALL1 0
- SATB2 0
- SC5D 0
- SCAPER 0
- SCN2A 0
- SCN8A 0
- SCO2 0
- SDHA 0
- SERAC1 0
- SETBP1 0
- SETD5 0
- SETDB2 0
- SGSH 0
- SHANK1 0
- SHANK2 0
- SHANK3 0
- SHH 0
- SHOC2 0
- SHOX 0
- SHROOM2 0
- SIL1 0
- SIX3 0
- SKI 0
- SLC12A6 0
- SLC17A5 0
- SLC25A15 0
- SLC25A22 0
- SLC25A53 0
- SLC25A6 0
- SLC26A9 0
- SLC2A1 0
- SLC31A1 0
- SLC33A1 0
- SLC35C1 0
- SLC4A4 0
- SLC6A1 0
- SLC6A17 0
- SLC6A8 0
- SMAD4 0
- SMARCA2 0
- SMARCA4 0
- SMARCB1 0
- SMARCC1 0
- SMARCC2 0
- SMARCD1 0
- SMARCD2 0
- SMARCD3 0
- SMARCE1 0
- SMC1A 0
- SMC3 0
- SMOC1 0
- SMPD1 0
- SNAP29 0
- SNTG1 0
- SOBP 0
- SOS1 0
- SOX10 0
- SOX5 0
- SPG11 0
- SPRED1 0
- SPRY3 0
- SPTAN1 0
- SPTLC2 0
- SRCAP 0
- SRD5A3 0
- SREBF2 0
- SRGAP3 0
- SRPX2 0
- ST3GAL3 0
- STAB2 0
- STAG1 0
- STARD8 0
- STIL 0
- STRA6 0
- STXBP1 0
- SUOX 0
- SURF1 0
- SVBP 1
- SYNCRIP 0
- SYNE1 0
- SYNGAP1 0
- SYT1 0
- SYT14 0
- SYTL4 0
- SYTL5 0
- TAF1 0
- TAF2 0
- TAF7L 0
- TANC2 0
- TAT 0
- TBC1D24 0
- TBC1D8B 0
- TBCE 0
- TCEAL3 0
- TCP10L2 0
- TECR 0
- TENM1 0
- TEPSIN 1
- TGFBR1 0
- TGFBR2 0
- THAP1 0
- THOC2 0
- THRB 0
- THUMPD1 0
- TKTL1 0
- TLR8 0
- TMCO1 0
- TMEM132E 0
- TMEM135 0
- TMEM165 0
- TMEM231 0
- TMEM237 0
- TMEM67 0
- TMLHE 0
- TNKS2 0
- TNPO2 0
- TPP1 0
- TREX1 0
- TREX2 0
- TRIO 0
- TRMT1 0
- TSC1 0
- TSC2 0
- TSC22D3 0
- TSEN2 0
- TSEN34 0
- TSEN54 0
- TTC8 0
- TTI2 0
- TUBA1A 0
- TUBA8 0
- TUBAL3 0
- TUBB2B 0
- TUSC3 0
- UBR1 0
- UBR7 0
- UBTF 0
- UPB1 0
- USP27X 0
- USP9X 0
- UTP14A 0
- VAMP7 0
- VLDLR 0
- VRK1 0
- WAC 0
- WDR11 0
- WDR13 0
- WDR45 0
- WDR45B 0
- WDR81 0
- WNK3 0
- WWC3 0
- XIAP 0
- XK 1
- XKRX 0
- XPA 0
- XPNPEP3 0
- YY1 0
- ZBTB16 0
- ZBTB18 0
- ZBTB40 0
- ZC3H14 0
- ZCCHC12 0
- ZCCHC8 0
- ZDHHC15 0
- ZFHX4 0
- ZFX 0
- ZFYVE26 0
- ZIC2 0
- ZMYM3 0
- ZMYM6 0
- ZMYND12 0
- ZNF425 0
- ZNF526 0
- ZNF592 0
Intellectual_disability
Gene: LAMP2 Green List (high evidence)EnsemblGeneIds (GRCh38): ENSG00000005893
EnsemblGeneIds (GRCh37): ENSG00000005893
OMIM: 309060, Gene2Phenotype
LAMP2 is in 23 panels
0 reviews
Details
- Mode of Inheritance
- X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
- Sources
-
- Known gene (Grozeva et al, 2015)
- Emory Genetics Laboratory
- Radboud University Medical Center, Nijmegen
- Radboud University Medical Center, Nijmegen
- Phenotypes
-
- Danon disease, 300257
- Intellectual disability
- OMIM
- 309060
- Clinvar variants
- Variants in LAMP2
- Penetrance
- Complete
- Panels with this gene
-
- Limb girdle muscular dystrophies, myofibrillar myopathies and distal myopathies
- Childhood onset dystonia, chorea or related movement disorder
- Undiagnosed metabolic disorders
- Ketotic hypoglycaemia
- Dilated Cardiomyopathy and conduction defects
- Vici Syndrome and other autophagy disorders
- Arthrogryposis
- Dilated and arrhythmogenic cardiomyopathy
- Retinal disorders
- Paediatric or syndromic cardiomyopathy
- Likely inborn error of metabolism
- Rhabdomyolysis and metabolic muscle disorders
- Progressive cardiac conduction disease
- Intellectual disability
- Hereditary neuropathy or pain disorder
- Congenital myopathy
- Hypertrophic cardiomyopathy
- Glycogen storage disease
- Fetal anomalies
- DDG2P
- Hereditary neuropathy
- Acute rhabdomyolysis
- Lysosomal storage disorder
History Filter Activity
Added New Source
Ellen McDonagh (Genomics England Curator)LAMP2 was added to Intellectual_disabilitypanel. Source: Known gene (Grozeva et al, 2015)
Set Mode of Inheritance
Ellen McDonagh (Genomics England Curator)Model of inheritance for gene LAMP2 was set to X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Added New Source
Ellen McDonagh (Genomics England Curator)LAMP2 was added to Intellectual_disabilitypanel. Source: Known gene (Grozeva et al, 2015)
Set Mode of Inheritance
Ellen McDonagh (Genomics England Curator)Model of inheritance for gene LAMP2 was set to X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Added New Source
Ellen McDonagh (Genomics England Curator)LAMP2 was added to Intellectual_disabilitypanel. Source: Radboud University Medical Center, Nijmegen
Added New Source
Ellen McDonagh (Genomics England Curator)LAMP2 was added to Intellectual_disabilitypanel. Sources: Emory Genetics Laboratory,Radboud University Medical Center, Nijmegen