Genes in panel
- AARS2 1
- AASS 1
- ABAT 1
- ABCA1 1
- ABCB11 1
- ABCB4 1
- ABCB7 2
- ABCD1 2
- ABCD4 1
- ABCG5 1
- ABCG8 1
- ABHD12 1
- ABHD5 1
- ACAD8 1
- ACAD9 2
- ACADM 2
- ACADS 1
- ACADSB 1
- ACADVL 2
- ACAT1 0
- ACO2 1
- ACOX1 1
- ACSF3 1
- ACY1 1
- ADA 3
- ADAR 1
- ADSL 1
- AFG3L2 0
- AGA 1
- AGK 0
- AGL 1
- AGPS 0
- AGXT 0
- AHCY 2
- AIFM1 0
- AKR1D1 1
- ALAD 1
- ALAS2 1
- ALDH18A1 1
- ALDH3A2 1
- ALDH4A1 1
- ALDH5A1 1
- ALDH6A1 1
- ALDH7A1 2
- ALDOA 1
- ALDOB 0
- ALG1 0
- ALG11 0
- ALG12 0
- ALG14 1
- ALG3 0
- ALG6 0
- ALG8 0
- ALG9 0
- ALPL 1
- AMACR 0
- AMN 1
- AMT 1
- ANO10 0
- APOA1 1
- APOA5 1
- APOB 1
- APOC2 1
- APOE 1
- APOPT1 1
- APRT 1
- APTX 0
- ARG1 0
- ARSA 1
- ARSB 0
- ARSE 1
- ASAH1 1
- ASL 0
- ASPA 1
- ASS1 0
- ATAD3A 4
- ATIC 2
- ATP13A2 1
- ATP5A1 3
- ATP5E 2
- ATP6AP1 0
- ATP6V0A2 0
- ATP7A 3
- ATP7B 1
- ATP8B1 1
- ATPAF2 0
- AUH 0
- B3GALNT2 0
- B3GALT6 0
- B3GAT3 0
- B3GLCT 1
- B4GALT1 0
- B4GALT7 0
- BAAT 1
- BCKDHA 0
- BCKDHB 0
- BCKDK 1
- BCS1L 0
- BOLA3 0
- BTD 0
- C12orf65 1
- C19orf12 1
- CA5A 1
- CAT 0
- CBS 2
- CCDC115 1
- CHCHD10 1
- CHKB 0
- CHST14 0
- CHST3 0
- CHST6 0
- CHSY1 0
- CISD2 1
- CLDN16 1
- CLDN19 1
- CLN3 1
- CLN5 1
- CLN6 1
- CLN8 1
- CLPB 1
- CLPP 0
- CNNM2 1
- COG1 0
- COG4 0
- COG5 0
- COG6 0
- COG7 0
- COG8 0
- COQ2 1
- COQ4 0
- COQ6 0
- COQ7 1
- COQ8A 1
- COQ8B 1
- COQ9 0
- COX10 0
- COX14 0
- COX15 0
- COX20 0
- COX6A1 0
- COX6B1 0
- COX7B 0
- CP 1
- CPOX 3
- CPS1 0
- CPT1A 0
- CPT2 2
- CTH 1
- CTNS 1
- CTSA 1
- CTSC 1
- CTSD 1
- CTSK 1
- CUBN 1
- CYC1 0
- CYP27A1 1
- CYP7B1 1
- D2HGDH 1
- DARS 1
- DARS2 0
- DBH 2
- DBT 0
- DCXR 2
- DDC 2
- DGUOK 0
- DHCR24 1
- DHCR7 2
- DHFR 0
- DHODH 1
- DHTKD1 1
- DLAT 0
- DLD 0
- DNA2 0
- DNAJC12 1
- DNAJC19 2
- DNAJC5 1
- DNM1L 0
- DNM2 1
- DOLK 0
- DPAGT1 0
- DPM1 0
- DPM2 1
- DPM3 3
- DPYD 2
- DPYS 1
- DYM 0
- EARS2 0
- EBP 1
- ECHS1 0
- ELAC2 0
- ENO3 2
- EPG5 1
- EPM2A 1
- ETFA 1
- ETFB 2
- ETFDH 1
- ETHE1 0
- EXT1 0
- EXT2 0
- FA2H 1
- FAH 1
- FAR1 0
- FARS2 0
- FASTKD2 0
- FBP1 0
- FBXL4 0
- FDX2 1
- FECH 2
- FGFR2 1
- FH 0
- FKRP 0
- FKTN 0
- FMO3 2
- FOLR1 0
- FOXRED1 0
- FTCD 2
- FUCA1 1
- FUT8 1
- FXN 1
- G6PC 1
- G6PC3 1
- GAA 2
- GABRG2 1
- GALC 1
- GALE 1
- GALK1 1
- GALNS 0
- GALNT3 0
- GALT 1
- GAMT 2
- GARS 1
- GATM 0
- GBA 1
- GBE1 1
- GCDH 1
- GCH1 1
- GCLC 1
- GDAP1 1
- GFER 0
- GFM1 0
- GFPT1 0
- GIF 2
- GK 1
- GLA 0
- GLB1 0
- GLDC 1
- GLRA1 1
- GLRX5 0
- GLUD1 0
- GLUL 1
- GLYCTK 1
- GM2A 1
- GMPPB 0
- GNE 0
- GNMT 1
- GNPAT 0
- GNPTAB 0
- GNPTG 0
- GNS 0
- GPD1 1
- GPHN 1
- GRHPR 0
- GSS 1
- GTPBP3 0
- GUSB 0
- GYG1 2
- GYS1 2
- GYS2 0
- HAAO 1
- HADH 1
- HADHA 1
- HADHB 1
- HAMP 1
- HARS2 2
- HCCS 0
- HCFC1 1
- HEXA 1
- HEXB 1
- HFE 1
- HFE2 2
- HGD 1
- HGSNAT 0
- HIBCH 0
- HLCS 0
- HMBS 2
- HMGCL 0
- HMGCS2 1
- HOGA1 0
- HPD 1
- HPRT1 1
- HPS1 1
- HS2ST1 1
- HSD17B10 1
- HSD17B4 0
- HSD3B7 2
- HSPD1 0
- HTRA2 1
- HYAL1 2
- IARS2 1
- IBA57 0
- IDH2 2
- IDS 0
- IDUA 0
- IER3IP1 2
- ISCA2 1
- ISCU 2
- ISPD 1
- ITPA 1
- IVD 0
- KARS 1
- KYNU 2
- L2HGDH 1
- LAMP2 2
- LARGE1 2
- LARS 1
- LARS2 0
- LBR 1
- LCAT 1
- LCT 1
- LDHA 1
- LDLR 1
- LDLRAP1 1
- LIAS 0
- LIPA 1
- LIPT1 0
- LMBRD1 1
- LONP1 0
- LPIN1 2
- LPL 1
- LRPPRC 0
- LYRM4 2
- MAGT1 1
- MAN1B1 0
- MAN2B1 1
- MANBA 1
- MAOA 1
- MARS2 1
- MAT1A 2
- MCCC1 1
- MCCC2 1
- MCEE 0
- MCOLN1 0
- MFF 1
- MFN2 0
- MFSD8 1
- MGAT2 0
- MGME1 0
- MLYCD 0
- MMAA 0
- MMAB 0
- MMACHC 1
- MMADHC 1
- MOCS1 1
- MOCS2 1
- MOGS 1
- MPDU1 0
- MPI 0
- MPV17 0
- MRPL3 2
- MRPS22 0
- MSMO1 1
- MT-ATP6 0
- MT-ATP8 0
- MT-CO1 0
- MT-CO2 0
- MT-CO3 0
- MT-CYB 0
- MTFMT 1
- MTHFR 0
- MT-ND1 0
- MT-ND2 0
- MT-ND3 0
- MT-ND4 1
- MT-ND4L 0
- MT-ND5 0
- MT-ND6 0
- MTO1 0
- MTPAP 3
- MTR 1
- MT-RNR1 1
- MTRR 1
- MT-TA 1
- MT-TC 0
- MT-TD 0
- MT-TE 0
- MT-TF 0
- MT-TG 0
- MT-TH 0
- MT-TI 0
- MT-TK 0
- MT-TL1 0
- MT-TL2 0
- MT-TM 0
- MT-TN 0
- MTTP 1
- MT-TP 0
- MT-TQ 0
- MT-TR 0
- MT-TS1 0
- MT-TS2 0
- MT-TV 0
- MT-TW 0
- MT-TY 0
- MUT 1
- MVK 1
- NAGA 1
- NAGLU 0
- NAGS 0
- NARS2 0
- NDUFA1 1
- NDUFA10 0
- NDUFA11 0
- NDUFA12 3
- NDUFA2 0
- NDUFAF1 0
- NDUFAF2 0
- NDUFAF3 0
- NDUFAF4 0
- NDUFAF5 0
- NDUFAF6 1
- NDUFB11 0
- NDUFB3 0
- NDUFC2 1
- NDUFS1 0
- NDUFS2 0
- NDUFS3 0
- NDUFS4 0
- NDUFS6 0
- NDUFS7 0
- NDUFS8 0
- NDUFV1 0
- NDUFV2 0
- NEU1 0
- NFU1 0
- NGLY1 1
- NHLRC1 1
- NNT 1
- NPC1 1
- NPC2 1
- NSDHL 1
- NT5C3A 1
- NUBPL 0
- OAT 0
- OCRL 2
- OGDH 2
- OPA1 0
- OPA3 0
- OTC 1
- OXCT1 0
- PAH 1
- PANK2 1
- PC 0
- PCBD1 1
- PCCA 0
- PCCB 0
- PCK1 2
- PCSK9 1
- PDHA1 0
- PDHB 0
- PDHX 0
- PDP1 0
- PDSS1 0
- PDSS2 0
- PEPD 1
- PET100 0
- PEX1 0
- PEX10 0
- PEX11B 0
- PEX12 0
- PEX13 0
- PEX14 0
- PEX16 0
- PEX19 0
- PEX2 0
- PEX26 0
- PEX3 0
- PEX5 0
- PEX6 1
- PEX7 0
- PFKM 2
- PGAM2 2
- PGAP2 0
- PGAP3 0
- PGK1 2
- PGM1 1
- PGM3 0
- PHGDH 1
- PHKA1 2
- PHKA2 0
- PHKB 1
- PHKG2 0
- PHYH 0
- PIGA 0
- PIGL 0
- PIGM 3
- PIGN 0
- PIGO 0
- PIGT 1
- PIGV 0
- PINK1 1
- PLA2G6 1
- PMM2 0
- PMPCA 0
- PNP 1
- PNPO 1
- PNPT1 0
- POLG 1
- POLG2 2
- POMGNT1 0
- POMGNT2 0
- POMT1 0
- POMT2 0
- POR 1
- PPA2 0
- PPOX 2
- PPT1 1
- PRKAG2 2
- PRODH 2
- PRPS1 1
- PSAP 0
- PSAT1 1
- PTS 2
- PUS1 1
- PYCR1 0
- PYGL 0
- PYGM 1
- QDPR 1
- RARS2 0
- RBCK1 2
- RBP4 2
- RFT1 0
- RMND1 0
- RNASEH1 0
- RPIA 2
- RPL10 1
- RRM2B 1
- SACS 0
- SAMHD1 0
- SAR1B 2
- SARS2 0
- SC5D 2
- SCO1 0
- SCO2 0
- SCP2 0
- SDHA 1
- SDHAF1 0
- SDHB 1
- SDHD 0
- SEC23B 1
- SERAC1 0
- SETX 2
- SGSH 0
- SI 2
- SKIV2L 2
- SLC12A3 2
- SLC16A1 1
- SLC17A5 1
- SLC18A2 2
- SLC19A2 0
- SLC19A3 0
- SLC22A5 2
- SLC25A1 1
- SLC25A12 2
- SLC25A13 0
- SLC25A15 0
- SLC25A19 0
- SLC25A20 0
- SLC25A22 0
- SLC25A26 0
- SLC25A3 1
- SLC25A38 0
- SLC25A4 1
- SLC25A46 0
- SLC2A1 2
- SLC2A2 0
- SLC30A10 1
- SLC35A1 2
- SLC35A2 3
- SLC35C1 0
- SLC35D1 0
- SLC37A4 1
- SLC39A14 1
- SLC39A4 2
- SLC39A8 1
- SLC3A1 2
- SLC40A1 1
- SLC46A1 0
- SLC52A2 2
- SLC52A3 1
- SLC5A1 2
- SLC6A19 3
- SLC6A3 2
- SLC6A8 2
- SLC7A7 0
- SLC7A9 2
- SMPD1 1
- SPG7 1
- SPR 2
- SPTLC1 2
- SPTLC2 2
- SRD5A3 0
- SSR4 0
- ST3GAL3 2
- ST3GAL5 0
- STS 2
- SUCLA2 1
- SUCLG1 0
- SUMF1 1
- SUOX 1
- SURF1 0
- TACO1 0
- TALDO1 1
- TANGO2 1
- TAT 2
- TAZ 1
- TCN2 2
- TFR2 1
- TIMM8A 0
- TK2 1
- TMEM165 0
- TMEM5 1
- TMEM70 0
- TPK1 0
- TPP1 1
- TRAP1 1
- TREX1 2
- TRIM37 0
- TRMU 0
- TRNT1 0
- TRPM6 1
- TSFM 1
- TTC19 0
- TTC37 2
- TTPA 2
- TUFM 2
- TUSC3 0
- TWNK 2
- TYMP 1
- UGT1A1 3
- UMOD 2
- UMPS 1
- UQCRB 3
- UROD 1
- UROS 2
- VARS2 0
- VIPAS39 2
- VKORC1 2
- VPS33B 2
- WDR45 1
- WFS1 3
- XDH 1
- XYLT1 1
- XYLT2 0
- YARS2 0
- ALG13 1
- COX4I2 1
- CSTB 1
- DHDDS 1
- GLS 3
- HSPA9 1
- LIPC 2
- MRPS16 2
- NDUFB9 2
- OPLAH 2
- PDK3 2
- PSPH 1
- RANBP2 2
- RNASET2 1
- RYR1 1
- SDHAF2 2
- SDHC 2
- STAT2 1
- TH 2
- UQCRQ 1
- UROC1 1
- ABCG2 1
- ALG2 1
- AMPD1 2
- AOX1 1
- ARSG 1
- ATXN7 2
- BCAT1 1
- BCAT2 2
- C1GALT1C1 1
- CD320 1
- CETP 1
- CLPS 1
- CNDP1 1
- COA5 1
- COX8A 1
- CYP7A1 1
- DHFR2 1
- DLST 2
- DMGDH 1
- DPEP1 1
- EGF 1
- FOLR2 1
- FOLR3 1
- FXYD2 1
- GALNT12 1
- GCSH 2
- GGT1 2
- HAL 1
- HYKK 1
- KHK 1
- LFNG 1
- LIPI 1
- MRPL12 1
- MTHFD1 1
- NAT8L 1
- NDUFA9 1
- NT5C 1
- NUP62 1
- PDK1 2
- PDK2 1
- PDK4 1
- PDP2 1
- PDPR 3
- PDXK 1
- PEX11A 1
- PHKG1 1
- PHYKPL 1
- PNLIP 1
- PPM1B 1
- PPM1K 1
- PREPL 2
- PTPRZ1 1
- RNASEH2A 2
- RNASEH2B 2
- RNASEH2C 2
- SARDH 1
- SCARB1 1
- SHPK 1
- SLC22A4 1
- SLC25A2 1
- SLC27A5 1
- SLC36A2 2
- SLC52A1 1
- SLC6A20 1
- SLCO1B1 1
- SLCO1B3 1
- SUCLG2 1
- SUGCT 1
- TCN1 2
- TDO2 1
- TM6SF2 1
- TMEM126A 2
- TPMT 1
- TREH 1
- UPB1 2
- USF1 1
- HIBADH 1
Undiagnosed metabolic disorders
Gene: STAT2 Amber List (moderate evidence)
STAT2 (signal transducer and activator of transcription 2)
EnsemblGeneIds (GRCh38): ENSG00000170581
EnsemblGeneIds (GRCh37): ENSG00000170581
OMIM: 600556, Gene2Phenotype
STAT2 is in 8 panels
EnsemblGeneIds (GRCh38): ENSG00000170581
EnsemblGeneIds (GRCh37): ENSG00000170581
OMIM: 600556, Gene2Phenotype
STAT2 is in 8 panels
1 review
Sarah Leigh (Genomics England Curator)
I don't know
Comment on list classification: Based on recommendation of Helen Britain (Clinical Fellow, Genomics England), that the majority of cases will be presenting in the context of overwhelming infection. The raised lactate and encephalomyopathy are potentially relevant phenotypes for this panel, however more evidence is needed on how common this presentation is, and whether it is always clearly associated with a proven infection.Created: 8 Aug 2019, 5:23 p.m. | Last Modified: 8 Aug 2019, 5:23 p.m.
Panel Version: 1.129
Sources: OtherCreated: 8 Aug 2019, 5:19 p.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Immunodeficiency 44 616636
Created: 8 Aug 2019, 5:19 p.m.
Panel version: 1.128
Panel version: 1.128
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Amber
- Other
- Phenotypes
-
- Immunodeficiency 44 616636
- OMIM
- 600556
- Clinvar variants
- Variants in STAT2
- Penetrance
- None
- Panels with this gene
History Filter Activity
8 Aug 2019, Gel status: 2
Entity classified by Genomics England curator
Sarah Leigh (Genomics England Curator)Gene: stat2 has been classified as Amber List (Moderate Evidence).
8 Aug 2019, Gel status: 1
Created, Added New Source, Set mode of inheritance, Set Phenotypes
Sarah Leigh (Genomics England Curator)gene: STAT2 was added gene: STAT2 was added to Undiagnosed metabolic disorders. Sources: Other Mode of inheritance for gene: STAT2 was set to BIALLELIC, autosomal or pseudoautosomal Phenotypes for gene: STAT2 were set to Immunodeficiency 44 616636 Review for gene: STAT2 was set to AMBER