Pancreatitis
Gene: CTSBEnsemblGeneIds (GRCh38): ENSG00000164733
EnsemblGeneIds (GRCh37): ENSG00000164733
OMIM: 116810, Gene2Phenotype
CTSB is in 3 panels
2 reviews
Ivone Leong (Genomics England Curator)
Initial gene list and info collated by Miranda Durkie Sheffield Diagnostic Genetics Service December 2018 on behalf of the GMS Gastrohepatology specialist test group. Gene Symbol submitted: CTSB; Suggested intial gene rating: Amber; Evidence for inclusion: none given; Evidence for exclusion: none given; Technical notes (e.g. non-coding/CNV mutations requiring coverage?): none givenCreated: 7 Jan 2019, 4:15 p.m.
Ellen McDonagh (Genomics England Curator)
Comment on publications: Polymorphisms in this gene have been associated with pancreatitis or tropical calcific pancreatitis, and the cathepsin B gene is involved in the pathology of pancreatitis (see publications). There does not seem to be enough evidence at this time for rare loss of function variants in this gene to be causative of hereditary pancreatitis.Created: 6 Dec 2018, 1:55 p.m.
Comment on publications: Polymorphisms in this gene have been associated with pancreatitis or tropical calcific pancreatitis, and the cathepsin B gene is involved in the pathology of pancreatitis (see publications). There does not seem to be enough evidence at this time for rare loss of function variants in this gene to be causative of hereditary pancreatitis.Created: 6 Dec 2018, 1:55 p.m.
Comment on publications: PMID: 30455353 - CTSC-deletion in mild and severe pancreatitis in vivo models was found to reduce the severity of pancreatitis compared to control mice.Created: 6 Dec 2018, 1:47 p.m.
Not associated with pancreatitis in OMIM or Gene2Phenotype.Created: 6 Dec 2018, 1:02 p.m.
Details
- Sources
-
- NHS GMS
- EUROPAC
- OMIM
- 116810
- Clinvar variants
- Variants in CTSB
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Added New Source
Ivone Leong (Genomics England Curator)Source NHS GMS was added to CTSB.
Panel promoted to version 1.0
Ellen McDonagh (Genomics England Curator)Ellen McDonagh: Not associated with pancreatit
Set publications
Ellen McDonagh (Genomics England Curator)Publications for gene: CTSB were set to 30455353; 30134826; 29229780; 29079517; 27226576; 22580415; 19900452; 16492714; 10995788
Set publications
Ellen McDonagh (Genomics England Curator)Publications for gene: CTSB were set to 30455353
Set publications
Ellen McDonagh (Genomics England Curator)Publications for gene: CTSB were set to
Added New Source
Ellen McDonagh (Genomics England Curator)CTSB was added to Pancreatitis panel. Sources: EUROPAC
Created
Ellen McDonagh (Genomics England Curator)CTSB was created by Ellen McDonagh