Parkinson Disease and Complex Parkinsonism
Gene: SLC41A1EnsemblGeneIds (GRCh38): ENSG00000133065
EnsemblGeneIds (GRCh37): ENSG00000133065
OMIM: 610801, Gene2Phenotype
SLC41A1 is in 5 panels
2 reviews
Arianna Tucci (Department of Molecular Neuroscience, UCL Institute of Neurology, Queen Square)
This gene encodes for a Mg transporter and has been sequenced in PD as a candidate gene. Has never been described in PD families.Created: 14 Dec 2016, 5:27 p.m.
Ellen McDonagh (Genomics England Curator)
Comment on list classification: Not reported with a phenotype in OMIM. There have been case-control studies reporting variants associated with increase risk or protection from PD. One case report of early onset PD, though unclear whether they looked at familial segregation.Created: 3 Nov 2016, 4:57 p.m.
Details
- Sources
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- Expert Review Red
- Radboud University Medical Center, Nijmegen
- Phenotypes
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- Parkinson disease (Yan (2011) Int J Neurosci 121,632)
- OMIM
- 610801
- Clinvar variants
- Variants in SLC41A1
- Penetrance
- Complete
- Publications
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- 27612022 and 26308152 - reduced risk of PD association
- 24661466 - A novel heterozygous variant (R244H) reported in the SLC41A1 gene was identified in one early onset PD patient, which not present either in 479 PD patients or 525 normal controls with age onset >50
- 21812739 and 20683486 novel heterozygous variants identified in PD patients
- Panels with this gene
History Filter Activity
panel promoted to version 1
Ellen McDonagh (Genomics England Curator)19th Dec 2016: panel revised according to expert review and further curation.
Gene classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Gene classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Set publications
Ellen McDonagh (Genomics England Curator)Publications for SLC41A1 were set to 27612022 and 26308152 - reduced risk of PD association; 24661466 - A novel heterozygous variant (R244H) reported in the SLC41A1 gene was identified in one early onset PD patient, which not present either in 479 PD patients or 525 normal controls with age onset >50; 21812739 and 20683486 novel heterozygous variants identified in PD patients
Created
Ellen McDonagh (Genomics England Curator)SLC41A1 was created by ellenmcdonagh
Added New Source
Ellen McDonagh (Genomics England Curator)SLC41A1 was added to Parkinson Disease and Complex Parkinsonismpanel. Sources: Radboud University Medical Center, Nijmegen