White matter disorders and cerebral calcification - narrow panel
Gene: DEGS1EnsemblGeneIds (GRCh38): ENSG00000143753
EnsemblGeneIds (GRCh37): ENSG00000143753
OMIM: 615843, Gene2Phenotype
DEGS1 is in 6 panels
3 reviews
Sarah Leigh (Genomics England Curator)
The rating of this gene has been updated to Green following NHS Genomic Medicine Service approval.Created: 30 Jan 2023, 4:26 p.m. | Last Modified: 30 Jan 2023, 4:26 p.m.
Panel Version: 2.9
Eleanor Williams (Genomics England Curator)
Comment on list classification: Promoting from grey to amber, but with a recommendation for green rating at the next GMS review. >3 cases reported with a plausible disease causing variant in DEGS1. Presentation is in young children.Created: 27 Apr 2021, 7:30 p.m. | Last Modified: 27 Apr 2021, 7:30 p.m.
Panel Version: 1.50
Associated with Leukodystrophy, hypomyelinating, 18 #618404 (AR) in OMIM.
PMID: 30620338 - Karsai et al 2019 - identified a missense variant in DEGS1 in a patient with a sphingolipid disorder with leukodystrophy and hypomyelination of the peripheral nervous system. The consanguineous parents were of Turkish origin. Motor developmental delay was first noted at 6 months.
PMID: 30620337 - Pant et al 2019 - report 19 individuals with hypomyelinating leukodystrophies from 13 unrelated families and homozygous or compound heterozygous variants identified in DEGS1 gene. The average age of onset was 5.6 months.
PMID: 31186544 - Dolgin et al 2019 - report a large inbred consanguineous Arab Israeli family in which 4 individuals presented with a complex neurological disorder with mild to severe intellectual disability, spastic quadriplegia, scoliosis and epilepsy. Brain MRI findings were suggestive of leukodystrophy. WES identified a missense variant in DEGS1 that segregated with the disorder. All presented with initial symptoms in early childhood (<2 years old).Created: 27 Apr 2021, 7:28 p.m. | Last Modified: 27 Apr 2021, 7:28 p.m.
Panel Version: 1.47
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Leukodystrophy, hypomyelinating, 18, OMIM:618404
Publications
Zornitza Stark (Australian Genomics)
20 individuals from 14 unrelated families. Hypomyelinating leukodystorphy is the prominent feature of this condition.
Sources: Expert listCreated: 15 Sep 2020, 10:10 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Leukodystrophy, hypomyelinating, 18, MIM#618404
Publications
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- NHS GMS
- Phenotypes
-
- Leukodystrophy, hypomyelinating, 18, OMIM:618404
- OMIM
- 615843
- Clinvar variants
- Variants in DEGS1
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Removed Tag
Sarah Leigh (Genomics England Curator)Tag Q2_21_rating was removed from gene: DEGS1.
Added New Source, Added New Source, Status Update
Sarah Leigh (Genomics England Curator)Source NHS GMS was added to DEGS1. Source Expert Review Green was added to DEGS1. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Entity classified by Genomics England curator
Eleanor Williams (Genomics England Curator)Gene: degs1 has been classified as Amber List (Moderate Evidence).
Added Tag
Eleanor Williams (Genomics England Curator)Tag Q2_21_rating tag was added to gene: DEGS1.
Set Phenotypes
Eleanor Williams (Genomics England Curator)Phenotypes for gene: DEGS1 were changed from Leukodystrophy, hypomyelinating, 18, MIM#618404 to Leukodystrophy, hypomyelinating, 18, OMIM:618404
Set publications
Eleanor Williams (Genomics England Curator)Publications for gene: DEGS1 were set to 30620338; 30620337
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes
Zornitza Stark (Australian Genomics)gene: DEGS1 was added gene: DEGS1 was added to White matter disorders and cerebral calcification - narrow panel. Sources: Expert list Mode of inheritance for gene: DEGS1 was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: DEGS1 were set to 30620338; 30620337 Phenotypes for gene: DEGS1 were set to Leukodystrophy, hypomyelinating, 18, MIM#618404 Review for gene: DEGS1 was set to GREEN gene: DEGS1 was marked as current diagnostic