White matter disorders and cerebral calcification - narrow panel
Gene: TMEM106BEnsemblGeneIds (GRCh38): ENSG00000106460
EnsemblGeneIds (GRCh37): ENSG00000106460
OMIM: 613413, Gene2Phenotype
TMEM106B is in 7 panels
3 reviews
Sarah Leigh (Genomics England Curator)
The rating of this gene has been updated following NHS Genomic Medicine Serviceapproval.Created: 9 Mar 2022, 4:29 p.m. | Last Modified: 9 Mar 2022, 4:29 p.m.
Panel Version: 1.223
Arina Puzriakova (Genomics England Curator)
Comment on list classification: There are sufficient unrelated cases (6) to promote the rating to Green at the next GMS panel update - hypomyelinating leukodystrophy is the predominant feature of the disease presentation.Created: 12 Nov 2020, 4:47 p.m. | Last Modified: 12 Nov 2020, 4:47 p.m.
Panel Version: 1.21
Associated with relevant phenotype in OMIM, and is a 'probable' gene for 'TMEM106B related hypomyelinating leukodystrophy' in Gene2Phenotype.
Recurrent variant c.754G>A p.(Asp252Asn) identified in 6 unrelated families from different ethnicities. Clinical characteristics include hypomyelinating leukodystrophy (6/6), nystagmus (6/6), hypotonia (5/6), cognitive impairment (5/6), movement disorder (3/6) and seizures (2/6).Created: 12 Nov 2020, 3:16 p.m. | Last Modified: 12 Nov 2020, 3:16 p.m.
Panel Version: 1.20
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Phenotypes
Leukodystrophy, hypomyelinating, 16 OMIM:617964
Publications
Zornitza Stark (Australian Genomics)
Five unrelated individuals reported with the same recurrent de novo missense variant in this gene, p.Asp252Asn. GoF mechanism postulated.Created: 16 Sep 2020, 5:11 a.m. | Last Modified: 16 Sep 2020, 5:11 a.m.
Panel Version: 1.14
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Leukodystrophy, hypomyelinating, 16 617964
Publications
Mode of pathogenicity
Other
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Green
- Phenotypes
-
- Leukodystrophy, hypomyelinating, 16, OMIM:617964
- Leukodystrophy, hypomyelinating, 16, MONDO:0054791
- Tags
- OMIM
- 613413
- Clinvar variants
- Variants in TMEM106B
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Removed Tag
Ivone Leong (Genomics England Curator)Tag for-review was removed from gene: TMEM106B.
Added New Source, Status Update
Ivone Leong (Genomics England Curator)Source Expert Review Green was added to TMEM106B. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: TMEM106B were changed from Leukodystrophy, hypomyelinating 16, MIM#617964 to Leukodystrophy, hypomyelinating, 16, OMIM:617964; Leukodystrophy, hypomyelinating, 16, MONDO:0054791
Added Tag
Arina Puzriakova (Genomics England Curator)Tag missense tag was added to gene: TMEM106B.
Set publications
Arina Puzriakova (Genomics England Curator)Publications for gene: TMEM106B were set to 29186371, 29444210
Entity classified by Genomics England curator
Arina Puzriakova (Genomics England Curator)Gene: tmem106b has been classified as Amber List (Moderate Evidence).
Added Tag
Arina Puzriakova (Genomics England Curator)Tag for-review tag was added to gene: TMEM106B.
Panel promoted to version 1.0
Louise Daugherty (Genomics England Curator)Checked against super panel made up of the panel constituents. Ready to promote to version 1
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes
Ellen McDonagh (Genomics England Curator)gene: TMEM106B was added gene: TMEM106B was added to White matter disorders and cerebral calcification - narrow panel. Sources: Expert Review Red Mode of inheritance for gene: TMEM106B was set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted Publications for gene: TMEM106B were set to 29186371, 29444210 Phenotypes for gene: TMEM106B were set to Leukodystrophy, hypomyelinating 16, MIM#617964