Cytopenia - NOT Fanconi anaemia
Gene: CYCSEnsemblGeneIds (GRCh38): ENSG00000172115
EnsemblGeneIds (GRCh37): ENSG00000172115
OMIM: 123970, Gene2Phenotype
CYCS is in 8 panels
3 reviews
Frances Smith (King's College Hospital)
Louise Daugherty (Genomics England Curator)
Gene reviewed due to Haematology Specialist Test Group considering the inclusion of relevant neutropenia thrombocytopenia genes. The Specialist Test Group 21st October 2019 (consisting of 4 centres: WWMGLH, NWGLH, YNEGLH, LSGLH) all agreed that there is enough evidence to rate this gene Green. Additional comments from Haematology Specialist Test Group (Copy of Extra genes R91_consensus_v2.xlsx) 21st October 2019. Wessex and West Midlands GLH: Autosomal dominant thrombocytopenia 4; North West GLH: no comment submitted; Yorkshire and North East GLH: rare (4 cases); London South GLH: no comment submitted.Created: 4 Nov 2019, 7:30 p.m. | Last Modified: 4 Nov 2019, 7:30 p.m.
Panel Version: 0.135
Comment on list classification: Comment on list classification: As discussed with the GMS Haematology Specialist Test Group at workshop 2nd July 2019. Gene was not submitted by all GLHs so needed further review by all the GLHs. All agreed that this gene should be in this panel and there is enough evidence to rate this gene Green.Created: 22 Jul 2019, 1:25 p.m. | Last Modified: 22 Jul 2019, 1:25 p.m.
Panel Version: 0.80
New review/rating by Frances Smith, Viapath Kings College Hospital (Curation_Template_GMS_Haem_FS_updated_reviews_20190425.xlsx) on behalf of London South GLH for the GMS Haematology specialist test group. Gene rated as Green.Created: 4 May 2019, 8:55 p.m.
Initial gene list (Consensus Genes for Panels_Haem_SHEFFIELD-29.01.2019.xlsx) collated by Mandy Nesbitt Sheffield Diagnostic Genetics Service, Sheffield Children's NHS Trust January 2019 on behalf of Yorkshire and North East GLH for the GMS Haematology specialist test group. Gene Symbol submitted: CYCS; Suggested initial gene rating: Green List (high evidence); Are variants in this gene part of your current diagnostic practice? No; Mode of inheritance: MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted; Phenotypes: 612004 Thrombocytopenia 4; PMID(s): none submittedCreated: 14 Feb 2019, 5:40 p.m.
Mandy nesbitt (Healthcare Professional)
Gene rating submitted by Mandy Nesbitt Sheffield Diagnostic Genetics Service, Sheffield Children's NHS Trust January 2019 on behalf of Yorkshire and North East GLH for the GMS Haematology specialist test group.Created: 14 Feb 2019, 5:39 p.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
612004 Thrombocytopenia 4
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert review Green
- North West GLH
- Wessex and West Midlands GLH
- Expert Review Green
- London South GLH
- NHS GMS
- Yorkshire and North East GLH
- Phenotypes
-
- Thrombocytopenia 4, OMIM:612004
- OMIM
- 123970
- Clinvar variants
- Variants in CYCS
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: CYCS were changed from Thrombocytopenia 4, 612004; Thrombocytopenia to Thrombocytopenia 4, OMIM:612004
Added New Source
Louise Daugherty (Genomics England Curator)Source Expert review Green was added to CYCS.
Added New Source, Added New Source
Louise Daugherty (Genomics England Curator)Source Wessex and West Midlands GLH was added to CYCS. Source North West GLH was added to CYCS.
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for gene: CYCS were changed from 612004 Thrombocytopenia 4; Thrombocytopenia to Thrombocytopenia 4, 612004; Thrombocytopenia
Entity classified by Genomics England curator
Louise Daugherty (Genomics England Curator)Gene: cycs has been classified as Green List (High Evidence).
Added New Source, Status Update
Louise Daugherty (Genomics England Curator)Source London South GLH was added to CYCS. Rating Changed from Green List (high evidence) to Green List (high evidence)
Set publications
Louise Daugherty (Genomics England Curator)Publications for gene: CYCS were set to
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for gene: CYCS were changed from 612004 Thrombocytopenia 4 to 612004 Thrombocytopenia 4; Thrombocytopenia
Set mode of inheritance
Louise Daugherty (Genomics England Curator)Mode of inheritance for gene: CYCS was changed from to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Entity classified by Genomics England curator
Louise Daugherty (Genomics England Curator)Gene: cycs has been classified as Green List (High Evidence).
Set Phenotypes
Louise Daugherty (Genomics England Curator)Added phenotypes 612004 Thrombocytopenia 4 for gene: CYCS
Added New Source
Louise Daugherty (Genomics England Curator)Source NHS GMS was added to CYCS.
Created, Added New Source, Set mode of inheritance
Louise Daugherty (Genomics England Curator)gene: CYCS was added gene: CYCS was added to Cytopenia - NOT Fanconi anaemia. Sources: Yorkshire and North East GLH Mode of inheritance for gene: CYCS was set to