Adult onset dystonia, chorea or related movement disorder
Gene: VPS16The rating of this gene has been updated following NHS Genomic Medicine Serviceapproval.Created: 11 Mar 2022, 1:37 p.m. | Last Modified: 1 Jun 2023, 3:52 p.m.
Panel Version: 3.2
Penetrance for gene VPS16 was set from None to Incomplete - some variants transmitted from an unaffected parent and heterozygous LoF variants are observed in presumably healthy individuals in gnomADCreated: 14 Jun 2021, 10:43 a.m. | Last Modified: 14 Jun 2021, 10:43 a.m.
Panel Version: 1.119
Comment on list classification: New gene added by James Polke (North Thames GLH). There is sufficient evidence to promote this gene to Green at the next GMS panel update - at least 19 unrelated families reported with progressive dystonia (both multifocal and generalised types described) in association with variants in this gene (publications updated with relevant literature). Variable age of onset ranging from 3 to 50 years.Created: 11 Jun 2021, 3:14 p.m. | Last Modified: 11 Jun 2021, 3:14 p.m.
Panel Version: 1.116
Comment on mode of inheritance: While most cases of VPS16-related dystonia have been due to heterozygous variants, one Chinese consanguineous family with dystonia has been found to harbour a homozygous missense variant (PMID:27174565). In view of only one biallelic case, MOI has been set as 'Monoallelic' - patients with biallelic variants would still be picked up by the Genomics England pipeline.
Furthermore, biallelic VPS16 variants have been linked to a mucopolysaccharidosis‐like disease - reviewed on the 'Lysosomal storage disorder' (R276) panel.Created: 11 Jun 2021, 3:13 p.m. | Last Modified: 11 Jun 2021, 3:13 p.m.
Panel Version: 1.115
18 individuals reported with high-impact variants in VPS16 and a progressive early onset dystonia (median age 12 years, range 3–50 years), with prominent oromandibular, bulbar, cervical, and upper limb involvement. Progressive generalization ensued, although most remained ambulant, and only a minority (16%) lost the ability to walk in adulthood.
Additional clinical features of mild to moderate intellectual disability and neuropsychiatric symptoms were present in approximately one‐third. In 4 individuals, magnetic resonance imaging (MRI) showed bilateral and symmetrical hypointensity of the globi pallidi and sometimes also the midbrain and dentate nuclei, suggestive of iron deposition. Mild generalized cerebral atrophy was also apparent in 4 individuals.
Sources: NHS GMSCreated: 28 May 2021, 12:18 p.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Dystonia; Dystonia Associated with Lysosomal Abnormalities; Dystonia 30; OMIM #619291
Publications
Tag Q2_21_rating was removed from gene: VPS16. Tag Q2_21_NHS_review was removed from gene: VPS16.
Source Expert Review Green was added to VPS16. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Penetrance for gene VPS16 was set from to None
Tag Q2_21_NHS_review tag was added to gene: VPS16.
Publications for gene: VPS16 were set to 32808683
Phenotypes for gene: VPS16 were changed from Dystonia; Dystonia Associated with Lysosomal Abnormalities; Dystonia 30; OMIM #619291 to Dystonia 30, OMIM:619291; Dystonia Associated with Lysosomal Abnormalities
Tag Q2_21_rating tag was added to gene: VPS16.
Gene: vps16 has been classified as Amber List (Moderate Evidence).
Mode of inheritance for gene: VPS16 was changed from MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
gene: VPS16 was added gene: VPS16 was added to Adult onset movement disorder. Sources: NHS GMS Mode of inheritance for gene: VPS16 was set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted Publications for gene: VPS16 were set to 32808683 Phenotypes for gene: VPS16 were set to Dystonia; Dystonia Associated with Lysosomal Abnormalities; Dystonia 30; OMIM #619291 Review for gene: VPS16 was set to GREEN