Cholestasis
Gene: SMPD1EnsemblGeneIds (GRCh38): ENSG00000166311
EnsemblGeneIds (GRCh37): ENSG00000166311
OMIM: 607608, Gene2Phenotype
SMPD1 is in 13 panels
2 reviews
Miranda Durkie (Genetics)
PMID: 27198631 reviewed the cause of death in 85 patients with Niemann-Pick B and B variant. Of these, 27 were newly reported and 58 were abstracted from the literature. Common disease-related morbidities included splenomegaly (97%), hepatomegaly (91%), liver dysfunction (83%), and pulmonary disease (75%).
Niemann Pick B associated with liver involvement
PMID: 31811098 Hepatic involvement in NPD is underestimated. It can presents as asymptomatic elevation of liver enzymes or acute liver failure or chronic liver disease with cirrhosis
Therefore if accepting overlapping phenotype of acute liver failure ok to rate as greenCreated: 20 Jan 2022, 2:09 p.m. | Last Modified: 20 Jan 2022, 2:09 p.m.
Panel Version: 1.103
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Niemann Pick disease A; Niemann Pick disease B
Publications
Ivone Leong (Genomics England Curator)
The rating of this gene has been updated following NHS Genomic Medicine Service approval.Created: 3 Mar 2022, 4:18 p.m. | Last Modified: 3 Mar 2022, 4:18 p.m.
Panel Version: 1.105
This gene has been added to this panel as it is Green on the Neonatal cholestasis panel (v1.16). It has been given an Amber review and awaiting feedback from GMS about whether this gene should be promoted to Green status or not.Created: 18 Nov 2020, 4:01 p.m. | Last Modified: 18 Nov 2020, 4:01 p.m.
Panel Version: 1.74
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- Expert list
- Phenotypes
-
- Niemann-Pick disease, type A, OMIM:257200, MONDO:0009756
- OMIM
- 607608
- Clinvar variants
- Variants in SMPD1
- Penetrance
- None
- Panels with this gene
-
- Niemann-Pick disease type A or B
- DDG2P
- Familial pulmonary fibrosis
- Intellectual disability
- Neonatal cholestasis
- Hyperammonaemia
- Fetal anomalies
- Undiagnosed metabolic disorders
- Fetal hydrops
- Lysosomal storage disorder
- Childhood onset dystonia, chorea or related movement disorder
- Likely inborn error of metabolism
- Cholestasis
History Filter Activity
Removed Tag, Removed Tag
Ivone Leong (Genomics England Curator)Tag for-review was removed from gene: SMPD1. Tag Q1_22_NHS_review was removed from gene: SMPD1.
Added New Source, Status Update
Ivone Leong (Genomics England Curator)Source Expert Review Green was added to SMPD1. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Added Tag
Ivone Leong (Genomics England Curator)Tag Q1_22_NHS_review tag was added to gene: SMPD1.
Added Tag
Ivone Leong (Genomics England Curator)Tag for-review tag was added to gene: SMPD1.
Created, Added New Source, Set mode of inheritance, Set Phenotypes
Ivone Leong (Genomics England Curator)gene: SMPD1 was added gene: SMPD1 was added to Cholestasis. Sources: Expert Review Amber,Expert list Mode of inheritance for gene: SMPD1 was set to BIALLELIC, autosomal or pseudoautosomal Phenotypes for gene: SMPD1 were set to Niemann-Pick disease, type A, OMIM:257200, MONDO:0009756