Adult onset hereditary spastic paraplegia
Gene: ATP13A2EnsemblGeneIds (GRCh38): ENSG00000159363
EnsemblGeneIds (GRCh37): ENSG00000159363
OMIM: 610513, Gene2Phenotype
ATP13A2 is in 20 panels
4 reviews
Chris Buxton (North Bristol NHS Trust)
Already Green on HSP panelCreated: 27 Apr 2019, 4:17 p.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Adult-onset lower-limb predominant spastic paraparesis; Spastic paraplegia 78, autosomal recessive, 617225; complicated hereditary spastic paraplegia
Publications
Louise Daugherty (Genomics England Curator)
Green gene with Amber GLH rating, Gene discussed in view of discrepant rating(s) from GLH(s). Green rating agreed at the GMS Neurology Specialist Test Group Webex on 17th May 2019.Created: 21 May 2019, 4:14 p.m.
Review and rating submitted byJames Polke (Neurogenetics Laboratory,Institute of Neurology, London), unless specified in the review comment, on behalf of London North GLH for GMS Neurology specialist test group.Created: 9 May 2019, 4:50 p.m.
Review and rating from Chris Buxton (North Bristol NHS Trust), submitted by Natalie Forrester (SWGLH - Bristol Genetics) on behalf of South West GLH for GMS Neurology specialist test group.Created: 27 Apr 2019, 4:30 p.m.
James Polke (Neurogenetics Laboratory, Institute of Neurology, London)
4 unrelated cases published to support diagnostic ratingCreated: 25 Apr 2019, 1:22 p.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Adult-onset lower-limb predominant spastic paraparesis; Spastic paraplegia 78, autosomal recessive, 617225; complicated hereditary spastic paraplegia; Kufor-Rakeb syndrome, 606693 AR
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Yorkshire and North East GLH
- South West GLH
- Expert Review Green
- NHS GMS
- London North GLH
- Phenotypes
-
- Kufor-Rakeb syndrome, 606693 AR
- Adult-onset lower-limb predominant spastic paraparesis
- Spastic paraplegia 78, autosomal recessive, 617225
- complicated hereditary spastic paraplegia
- OMIM
- 610513
- Clinvar variants
- Variants in ATP13A2
- Penetrance
- None
- Publications
- Panels with this gene
-
- Structural basal ganglia disorders
- Undiagnosed metabolic disorders
- Hereditary neuropathy or pain disorder
- Intellectual disability
- Childhood onset dystonia, chorea or related movement disorder
- DDG2P
- Neuronal ceroid lipofuscinosis
- Retinal disorders
- Structural eye disease
- Adult onset neurodegenerative disorder
- Likely inborn error of metabolism
- Childhood onset hereditary spastic paraplegia
- Parkinson Disease and Complex Parkinsonism
- Early onset dystonia
- Hereditary spastic paraplegia
- Adult onset dystonia, chorea or related movement disorder
- Adult onset hereditary spastic paraplegia
- Glaucoma (developmental)
- Fetal anomalies
- Lysosomal storage disorder
History Filter Activity
Set publications
Louise Daugherty (Genomics England Curator)Publications for gene: ATP13A2 were set to 28137957; 27217339
Added New Source
Louise Daugherty (Genomics England Curator)Source Yorkshire and North East GLH was added to ATP13A2.
Set Phenotypes, Set publications
Louise Daugherty (Genomics England Curator)Added phenotypes Adult-onset lower-limb predominant spastic paraparesis; Spastic paraplegia 78, autosomal recessive, 617225; complicated hereditary spastic paraplegia for gene: ATP13A2 Publications for gene ATP13A2 were changed from to 28137957; 27217339
Added New Source
Louise Daugherty (Genomics England Curator)Source South West GLH was added to ATP13A2.
Added New Source, Set mode of inheritance, Set Phenotypes, Status Update
Louise Daugherty (Genomics England Curator)Source Expert Review Green was added to ATP13A2. Mode of inheritance for gene ATP13A2 was changed from to BIALLELIC, autosomal or pseudoautosomal Added phenotypes Kufor-Rakeb syndrome, 606693 AR; Adult-onset lower-limb predominant spastic paraparesis; Spastic paraplegia 78, autosomal recessive, 617225; complicated hereditary spastic paraplegia for gene: ATP13A2 Rating Changed from Red List (low evidence) to Green List (high evidence)
Added New Source
Louise Daugherty (Genomics England Curator)Source NHS GMS was added to ATP13A2.
Created, Added New Source, Set mode of inheritance
Louise Daugherty (Genomics England Curator)gene: ATP13A2 was added gene: ATP13A2 was added to Hereditary spastic paraplegia - adult onset. Sources: London North GLH Mode of inheritance for gene: ATP13A2 was set to