Familial hypercholesterolaemia
Gene: LDLREnsemblGeneIds (GRCh38): ENSG00000130164
EnsemblGeneIds (GRCh37): ENSG00000130164
OMIM: 606945, Gene2Phenotype
LDLR is in 9 panels
3 reviews
Ellen McDonagh (Genomics England Curator)
On the Inherited Cardiac Condition Genes panel for Familial Hypercholesterolaemia reported in: Development of a Comprehensive Sequencing Assay for Inherited Cardiac Condition Genes, Pua et al, Journal of Cardiovascular Translational Research, online Feb 2016 (doi:10.1007/s12265-016-9673-5). The panel contains disease-causing, putatively pathogenic, research and phenocopy genes, and it is unclear from the publication whether this gene falls into the disease-causing category. No. of mutations indicated in supplemental table = 1517.
Created: 19 Feb 2016, 2:48 p.m.
Ellen Thomas (Genomics England)
Loss-of-function and some missense are relevant here, but there are lots of missense variants which aren't pathogenic.Created: 2 Dec 2015, 10:08 a.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Variants in this GENE are reported as part of current diagnostic practice
steve Humphries (UCL)
most common cause of FHCreated: 24 Nov 2015, 4:37 p.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
hypercholesterolaemia; elevated LDL-Cholesterol
Publications
- Genetic causes of familial hypercholesterolaemia in patients in the UK: relation to plasma lipid levels and coronary heart disease risk. Humphries SE, Whittall RA, Hubbart CS, Maplebeck S, Cooper JA, Soutar AK, Naoumova R, Thompson GR, Seed M, Durrington PN, Miller JP, Betteridge DJ, Neil HA
- Simon Broome Familial Hyperlipidaemia Register Group and Scientific Steering Committee. J Med Genet. 2006 Dec
- 43(12):943-9. Erratum in: J Med Genet. 2010 Dec
- 47(12):862. J Med Genet. 2009 Dec
- 46(12):861. PMID: 17142622
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Green
- UKGTN
- Emory Genetics Laboratory
- Illumina TruGenome Clinical Sequencing Services
- Radboud University Medical Center, Nijmegen
- Eligibility statement prior genetic testing
- Phenotypes
-
- Gene part of the Global Lipid Genetic Consortium 12-SNP LDL-C gene score calculation (Talmud et al, 2013)
- Gene part of the 6-SNP LDL-C gene score calculation (Futema et al, 2015)
- C3 Hypercholesterolemia, familial, 143890
- LDL cholesterol level QTL2, 143890
- Familial Hypercholesterolemia
- Hypercholesterolemia
- Familial Hypercholesterolaemia
- OMIM
- 606945
- Clinvar variants
- Variants in LDLR
- Penetrance
- Complete
- Publications
- Panels with this gene
-
- Childhood onset dystonia, chorea or related movement disorder
- Likely inborn error of metabolism
- Familial hypercholesterolaemia
- Additional findings health related - children
- Additional findings health related - CNV analysis children
- Additional findings health related
- Familial hypercholesterolaemia (GMS)
- COVID-19 research
- Undiagnosed metabolic disorders
History Filter Activity
Set publications
Sarah Leigh (Genomics England Curator)Publications for gene: LDLR were set to PMID: 23433573; 25414277
Gene classified by Genomics England curator
Ellen Thomas (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set Mode of Inheritance
Ellen Thomas (Genomics England Curator)Mode of inheritance for LDLR was changed to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Added New Source
Ellen McDonagh (Genomics England Curator)LDLR was added to Familial hypercholesterolaemiapanel. Source: UKGTN
Added New Source
Ellen McDonagh (Genomics England Curator)LDLR was added to Familial hypercholesterolaemiapanel. Source: Emory Genetics Laboratory
Set Mode of Inheritance
Ellen McDonagh (Genomics England Curator)Model of inheritance for gene LDLR was set to MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Added New Source
Ellen McDonagh (Genomics England Curator)LDLR was added to Familial hypercholesterolaemiapanel. Source: Illumina TruGenome Clinical Sequencing Services
Added New Source
Ellen McDonagh (Genomics England Curator)LDLR was added to Familial hypercholesterolaemiapanel. Source: Radboud University Medical Center, Nijmegen
Added New Source
Ellen McDonagh (Genomics England Curator)LDLR was added to Familial hypercholesterolaemiapanel. Source: Radboud University Medical Center, Nijmegen
Added New Source
Ellen McDonagh (Genomics England Curator)LDLR was added to Familial hypercholesterolaemiapanel. Sources: Eligibility statement prior genetic testing