Clefting
Gene: FREM2EnsemblGeneIds (GRCh38): ENSG00000150893
EnsemblGeneIds (GRCh37): ENSG00000150893
OMIM: 608945, Gene2Phenotype
FREM2 is in 13 panels
1 review
Louise Daugherty (Genomics England Curator)
Comment on list classification: Changed status from amber to red, not enough evidence to support the clefting phenotype.Created: 31 May 2017, 8:32 a.m.
Update from clinical team. No evidence for this gene specifically resulting in the clefting phenotype and there are sufficient other clues (ocular for example) to lead to the diagnosis.
Created: 31 May 2017, 8:31 a.m.
Refer to clinical team- there is evidence for Fraser syndrome but FREM2 mutations do not specifically result in a clear clefting phenotype (no evidence in the literature)Created: 29 May 2017, 3:46 p.m.
Comment on publications: In review paper PMID: 18671281 the clefting phenotype was not reported in a any of the 6 unrelated Fraser Syndrome cases with the FREM2 mutationCreated: 29 May 2017, 3:44 p.m.
Comment on phenotypes: Fraser syndrome is a rare autosomal recessive disorder characterized by cryptophthalmos, syndactyly, ambiguous genitalia, laryngeal and genitourinary malformations, oral clefting, and mental retardation ( Slavotinek et al., 2006)Created: 29 May 2017, 3:34 p.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Fraser syndrome, 219000
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Red
- Expert list
- Illumina TruGenome Clinical Sequencing Services
- Radboud University Medical Center, Nijmegen
- Phenotypes
-
- Fraser syndrome, 219000
- OMIM
- 608945
- Clinvar variants
- Variants in FREM2
- Penetrance
- Complete
- Publications
- Panels with this gene
-
- Deafness and congenital structural abnormalities
- Unexplained kidney failure in young people
- Retinal disorders
- Clefting
- Unexplained young onset end-stage renal disease - additional genes
- Structural eye disease
- Limb disorders
- Glaucoma (developmental)
- Intellectual disability
- Fetal anomalies
- DDG2P
- Anophthalmia or microphthalmia
- CAKUT
History Filter Activity
panel promoted to version 1
Louise Daugherty (Genomics England Curator)Panel reviews were assessed, and panel was revised according to reviews and further curation 31st May 2017
Gene classified by Genomics England curator
Louise Daugherty (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Set publications
Louise Daugherty (Genomics England Curator)Publications for FREM2 were set to 16894541; 15838507;18203166;18671281
Set publications
Louise Daugherty (Genomics England Curator)Publications for FREM2 were set to 16894541; 15838507;18203166;18671281
Set publications
Louise Daugherty (Genomics England Curator)Publications for FREM2 were set to 16894541
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for FREM2 were set to Fraser syndrome, 219000
Added New Source
Louise Daugherty (Genomics England Curator)FREM2 was added to Cleftingpanel. Sources: Expert list,Radboud University Medical Center, Nijmegen,Illumina TruGenome Clinical Sequencing Services
Created
Louise Daugherty (Genomics England Curator)FREM2 was created by LouiseD