Clefting
Gene: GATA3EnsemblGeneIds (GRCh38): ENSG00000107485
EnsemblGeneIds (GRCh37): ENSG00000107485
OMIM: 131320, Gene2Phenotype
GATA3 is in 10 panels
1 review
Louise Daugherty (Genomics England Curator)
Comment on phenotypes: The syndrome been associated with a heart defect and cleft palate and Other atypical findings including retinitis pigmentosa, psoriasis and growth failure. However, clefting does not seem to be a clear feature of this disorder.Created: 30 May 2017, 2:22 p.m.
Comment on list classification: downgraded from Green to Amber- enough cases to support the disorder but not enough cases in the literature to support clefting phenotypeCreated: 30 May 2017, 2:15 p.m.
Comment on publications: Although enough evidence to support the disorder there is not enough cases to support the clefting phenotype - eg: one case reported in PMID:19659764Created: 30 May 2017, 2:14 p.m.
Comment on phenotypes: added synonymsCreated: 30 May 2017, 2:01 p.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Phenotypes
Hypoparathyroidism, sensorineural deafness, and renal dysplasia, 146255
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
- Sources
-
- Expert Review Amber
- Illumina TruGenome Clinical Sequencing Services
- Radboud University Medical Center, Nijmegen
- Expert list
- UKGTN
- Phenotypes
-
- Hypoparathyroidism, sensorineural deafness, and renal dysplasia, 146255
- Barakat syndrome
- HDR syndrome
- OMIM
- 131320
- Clinvar variants
- Variants in GATA3
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
panel promoted to version 1
Louise Daugherty (Genomics England Curator)Panel reviews were assessed, and panel was revised according to reviews and further curation 31st May 2017
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for GATA3 were set to Hypoparathyroidism, sensorineural deafness, and renal dysplasia, 146255; Barakat syndrome; HDR syndrome
Gene classified by Genomics England curator
Louise Daugherty (Genomics England Curator)This gene has been classified as Amber List (Moderate Evidence).
Set publications
Louise Daugherty (Genomics England Curator)Publications for GATA3 were set to 28303854; 19659764;10935639;11389161;21834031
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for GATA3 were set to Hypoparathyroidism, sensorineural deafness, and renal dysplasia, 146255; Barakat syndrome; HDR syndrome
Added New Source
Louise Daugherty (Genomics England Curator)GATA3 was added to Cleftingpanel. Sources: Expert list,Radboud University Medical Center, Nijmegen,UKGTN,Illumina TruGenome Clinical Sequencing Services
Created
Louise Daugherty (Genomics England Curator)GATA3 was created by LouiseD