Genes in panel

Hereditary neuropathy or pain disorder

Gene: HPDL

Green List (high evidence)

HPDL (4-hydroxyphenylpyruvate dioxygenase like)
EnsemblGeneIds (GRCh38): ENSG00000186603
EnsemblGeneIds (GRCh37): ENSG00000186603
HPDL is in 10 panels

3 reviews

Sarah Leigh (Genomics England Curator)

Green List (high evidence)

The rating of this gene has been updated to green following NHS Genomic Medicine Service approval.
Created: 24 Feb 2025, 5:02 p.m. | Last Modified: 24 Feb 2025, 5:02 p.m.
Panel Version: 6.148

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Eleanor Williams (Genomics England Curator)

Green List (high evidence)

Comment on list classification: On recommendation of clinical expert this gene has been promoted to amber and has been tagged for promotion to green subject to GMS review.
Created: 26 Oct 2024, 10:18 p.m. | Last Modified: 26 Oct 2024, 10:18 p.m.
Panel Version: 5.103
In PubMed:32707086 - Husain et al 2020 - in 13 families (17 individuals) with a progressive, pediatric-onset spastic movement disorder with variable clinical presentation exome sequencing identified biallelic HPDL variants (missense and nonsense). Clinical presentation ranged from severe, neonatal-onset neurodevelopmental delay with neuroimaging findings resembling mitochondrial encephalopathy to milder manifestation of adolescent-onset, isolated hereditary spastic paraplegia. All affected individuals developed spasticity predominantly of the lower limbs over the course of the disease. Demyelinating neuropathy was present in three individuals. HPDL protein level in fibroblasts from severely affected individuals were compared to control fibroblasts and were found to be reduced. In murine cells HPDL co-localizes with the mitochondria, but in patient fibroblasts they did not observe a consistent signature of mitochondrial dysfunction.
Created: 26 Oct 2024, 10:17 p.m. | Last Modified: 26 Oct 2024, 10:17 p.m.
Panel Version: 5.102

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Neurodevelopmental disorder with progressive spasticity and brain white matter abnormalities, OMIM:619026; Spastic paraplegia 83, autosomal recessive, OMIM:619027; neurodevelopmental disorder with progressive spasticity and brain white matter abnormalities, MONDO:0033613; spastic paraplegia 83, autosomal recessive, MONDO:0033614

Publications

Alexander Rossor (UCL Institute of Neurology)

Green List (high evidence)

3 had peripheral neuropathy
Sources: Expert list
Created: 19 Oct 2024, 10:41 p.m.

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
developmental delay; spastic paraplegia; peripheral neuropathy

Publications

Details

Mode of Inheritance
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Neurodevelopmental disorder with progressive spasticity and brain white matter abnormalities, OMIM:619026
  • Spastic paraplegia 83, autosomal recessive, OMIM:619027
  • neurodevelopmental disorder with progressive spasticity and brain white matter abnormalities, MONDO:0033613
  • spastic paraplegia 83, autosomal recessive, MONDO:0033614
Tags
gene-checked
Clinvar variants
Variants in HPDL
Penetrance
Complete
Publications
Panels with this gene

History Filter Activity

24 Feb 2025, Gel status: 3

Removed Tag, Removed Tag

Sarah Leigh (Genomics England Curator)

Tag Q3_24_promote_green was removed from gene: HPDL. Tag Q3_24_NHS_review was removed from gene: HPDL.

24 Feb 2025, Gel status: 3

Added New Source, Added New Source, Status Update

Sarah Leigh (Genomics England Curator)

Source NHS GMS was added to HPDL. Source Expert Review Green was added to HPDL. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)

11 Dec 2024, Gel status: 2

Added Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag gene-checked tag was added to gene: HPDL.

26 Oct 2024, Gel status: 2

Added Tag, Added Tag

Eleanor Williams (Genomics England Curator)

Tag Q3_24_promote_green tag was added to gene: HPDL. Tag Q3_24_NHS_review tag was added to gene: HPDL.

26 Oct 2024, Gel status: 2

Set Phenotypes

Eleanor Williams (Genomics England Curator)

Phenotypes for gene: HPDL were changed from developmental delay; spastic paraplegia; peripheral neuropathy to Neurodevelopmental disorder with progressive spasticity and brain white matter abnormalities, OMIM:619026; Spastic paraplegia 83, autosomal recessive, OMIM:619027; neurodevelopmental disorder with progressive spasticity and brain white matter abnormalities, MONDO:0033613; spastic paraplegia 83, autosomal recessive, MONDO:0033614

26 Oct 2024, Gel status: 2

Entity classified by Genomics England curator

Eleanor Williams (Genomics England Curator)

Gene: hpdl has been classified as Amber List (Moderate Evidence).

19 Oct 2024, Gel status: 0

Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes, Set penetrance

Alexander Rossor (UCL Institute of Neurology)

gene: HPDL was added gene: HPDL was added to Hereditary neuropathy or pain disorder. Sources: Expert list Mode of inheritance for gene: HPDL was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: HPDL were set to 32707086 Phenotypes for gene: HPDL were set to developmental delay; spastic paraplegia; peripheral neuropathy Penetrance for gene: HPDL were set to Complete Review for gene: HPDL was set to GREEN