Mitochondrial disorders
Gene: HMGCLEnsemblGeneIds (GRCh38): ENSG00000117305
EnsemblGeneIds (GRCh37): ENSG00000117305
OMIM: 613898, Gene2Phenotype
HMGCL is in 11 panels
4 reviews
Sarah Leigh (Genomics England Curator)
Comment on list classification: HMGCL is being demoted to Red on this panel on the recommendation of the GMS mitochondrial specialist test group, including by Carl Fratter (Oxford University Hospitals NHS Trust). It is associated with HMG-CoA lyase deficiency 246450, with microcephaly, seizures & metabolic disturbance. Although this is technically a mitochondrial disorder, the phenotype is quite different to other mitochondrial conditions.Created: 1 Aug 2019, 1:35 p.m. | Last Modified: 1 Aug 2019, 1:35 p.m.
Panel Version: 1.416
Anna de Burca (Oxford University Hospitals NHS Foundation Trust)
Potential differential diagnosis for mitochondrial disorder, with elevated lactate, seizures, basal ganglia abnormalilty etcCreated: 19 Jun 2019, 12:26 p.m.
Phenotypes
HMG-CoA lyase deficiency, 246450
Carl Fratter (Oxford University Hospitals NHS Trust)
Red - fatty acid oxidation disorder, rather than a primary mitochondrial disorderCreated: 11 Jun 2019, 3:59 p.m.
Phenotypes
HMG-CoA lyase deficiency, 246450
Louise Daugherty (Genomics England Curator)
Added from Intellectual disability panel update as this gene is also relevant to theMitochondrial disorders panel. This is a Confirmed disease gene in Developmental Disorders Genotype-Phenotype Database (DDG2P) for 3-Hydroxy-3-methylglutaryl-CoA lyase deficiency. Grunert (2017) PMID: 28583327 reviewed the clinical presentation and outcome in a series of 37 patients with HMGCLD. 10 had no further metabolic decompensations after diagnosis, and 22 had at least one more metabolic crisis, most often associated with infections, especially gastroenteritis or respiratory tract infections. Half of the patients had normal cognitive development, and the remainder had psychomotor deficits of variable severity.Created: 18 Dec 2017, 4:15 p.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
HMG-CoA lyase deficiency, 246450; 3-Hydroxy-3-methylglutaryl-CoA lyase deficiency; HMGCLD; intellectual disability
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Red
- Other
- Phenotypes
-
- HMG-CoA lyase deficiency, 246450
- 3-Hydroxy-3-methylglutaryl-CoA lyase deficiency
- HMGCLD
- OMIM
- 613898
- Clinvar variants
- Variants in HMGCL
- Penetrance
- None
- Publications
- Panels with this gene
-
- Likely inborn error of metabolism
- Undiagnosed metabolic disorders
- Mitochondrial disorders
- Childhood onset dystonia, chorea or related movement disorder
- Early onset or syndromic epilepsy
- Hyperammonaemia
- Possible mitochondrial disorder - nuclear genes
- Intellectual disability
- Fetal anomalies
- Adult onset leukodystrophy
- DDG2P
History Filter Activity
Entity classified by Genomics England curator
Sarah Leigh (Genomics England Curator)Gene: hmgcl has been classified as Red List (Low Evidence).
Entity classified by Genomics England curator
Sarah Leigh (Genomics England Curator)Gene: hmgcl has been classified as Red List (Low Evidence).
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for HMGCL were set to HMG-CoA lyase deficiency, 246450; 3-Hydroxy-3-methylglutaryl-CoA lyase deficiency; HMGCLD
Gene classified by Genomics England curator
Louise Daugherty (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Added New Source
Louise Daugherty (Genomics England Curator)HMGCL was added to Mitochondrial disorders panel. Sources: Other
Created
Louise Daugherty (Genomics England Curator)HMGCL was created by Louise Daugherty