Monogenic hearing loss
Gene: OXR1EnsemblGeneIds (GRCh38): ENSG00000164830
EnsemblGeneIds (GRCh37): ENSG00000164830
OMIM: 605609, Gene2Phenotype
OXR1 is in 4 panels
1 review
Achchuthan Shanmugasundram (Genomics England Curator)
Comment on gene rating: This gene should be rated AMBER as there is one case and supportive functional data to associate OXR1 with hearing loss.
A four years old girl was identified with a novel homozygous missense variant (c.233A > G, p.Lys78Arg) in OXR1 gene and was reported with sensorineural hearing loss.
Functional studies in zebrafish model showed that the ortholog orx1b gene is expressed in the statoacoustic ganglion (SAG, a sensory ganglion of ear) and posterior lateral line ganglion (pLL). In addition, knockdown of oxr1b resulted in a significant developmental defect of SAG and pLL and this phenotype was rescued by co-injection of wild-type human OXR1 mRNAs, but not mutant OXR1 (c.233A > G) mRNAs.
This gene has not yet been associated with hearing loss either in OMIM or in Gene2Phenotype.
Sources: LiteratureCreated: 9 Mar 2023, 1:49 p.m. | Last Modified: 9 Mar 2023, 1:53 p.m.
Panel Version: 3.14
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
sensorineural hearing loss disorder, MONDO:0020678
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Amber
- Literature
- Phenotypes
-
- sensorineural hearing loss disorder, MONDO:0020678
- OMIM
- 605609
- Clinvar variants
- Variants in OXR1
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Entity classified by Genomics England curator
Achchuthan Shanmugasundram (Genomics England Curator)Gene: oxr1 has been classified as Amber List (Moderate Evidence).
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes
Achchuthan Shanmugasundram (Genomics England Curator)gene: OXR1 was added gene: OXR1 was added to Monogenic hearing loss. Sources: Literature Mode of inheritance for gene: OXR1 was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: OXR1 were set to 36130215 Phenotypes for gene: OXR1 were set to sensorineural hearing loss disorder, MONDO:0020678 Review for gene: OXR1 was set to AMBER