Monogenic hearing loss
Gene: PDZD7EnsemblGeneIds (GRCh38): ENSG00000186862
EnsemblGeneIds (GRCh37): ENSG00000186862
OMIM: 612971, Gene2Phenotype
PDZD7 is in 4 panels
4 reviews
Jun Shen (Harvard Medical School)
Mode of inheritance
Other
Phenotypes
#276901:{Retinal disease in Usher syndrome type IIA, modifier of}[Hearing loss, congenital, sensorineural, moderate-severeNormal vestibular response; Retinitis pigmentosa, progressive]; #605472:Usher syndrome, type IIC, GPR98/PDZD7 digenic[Hearing loss, congenital sensorineural, moderate-severe; Retinitis pigmentosa, progressive]
Maria Bitner-Glindzicz (UCL)
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Variants in this GENE are reported as part of current diagnostic practice
Ellen McDonagh (Genomics England Curator)
Comment when marking as ready: Discussed internally and agreement that this should be green.Created: 7 Mar 2016, 1:55 p.m.
Comment on list classification: For nonsyndromic congenital hearing.Created: 7 Mar 2016, 1:54 p.m.
PMID: 26416264 (4 Iranian families) and PMID: 26849169 (2 probands) support the role of biallelic mutations in this gene as causative of autosomal recessive non-syndromic hearing loss (when Usher syndrome phenotypes are ruled out). Knockout mice have congenital profound deafness. Previous reports supported the role of PDZD7 mutations as modifiers of Usher Syndrome as mutations in other known genes were present/could be involved (digenic effect) PMID:19028668; 20440071.Created: 4 Mar 2016, 3:14 p.m.
Damian Smedley (Genomics England Curator)
Comment when marking as ready: Expert review and OMIM confirmedCreated: 29 Jan 2016, 4:10 p.m.
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- Expert
- Radboud University Medical Center, Nijmegen
- Emory Genetics Laboratory
- UKGTN
- Phenotypes
-
- #605472:Usher syndrome, type IIC, GPR98/PDZD7 digenic
- autosomal recessive nonsyndromic hearing loss
- OMIM
- 612971
- Clinvar variants
- Variants in PDZD7
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
Gene classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Gene classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set Phenotypes
Ellen McDonagh (Genomics England Curator)Phenotypes for PDZD7 were set to #605472:Usher syndrome, type IIC, GPR98/PDZD7 digenic; autosomal recessive nonsyndromic hearing loss
Set publications
Ellen McDonagh (Genomics England Curator)Publications for PDZD7 were set to PMID:19028668; 20440071; 26849169; 26416264
Set Mode of Inheritance
Ellen McDonagh (Genomics England Curator)Mode of inheritance for PDZD7 was changed to BIALLELIC, autosomal or pseudoautosomal
Set Mode of Inheritance
Ellen McDonagh (Genomics England Curator)Mode of inheritance for PDZD7 was changed to Other - please specifiy in evaluation comments
Gene classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)This gene has been classified as Amber List (Moderate Evidence).
Set Phenotypes
Ellen McDonagh (Genomics England Curator)Phenotypes for PDZD7 were set to #276901:{Retinal disease in Usher syndrome type IIA, modifier of}[Hearing loss, congenital, sensorineural, moderate-severe, Normal vestibular response, Retinitis pigmentosa, progressive]; #605472:Usher syndrome, type IIC, GPR98/PDZD7 digenic [Hearing loss, congenital sensorineural, moderate-severe, Retinitis pigmentosa, progressive]
Set publications
Ellen McDonagh (Genomics England Curator)Publications for PDZD7 were set to PMID:19028668; 20440071
Set Mode of Inheritance
Damian Smedley (Genomics England Curator)Mode of inheritance for PDZD7 was changed to BIALLELIC, autosomal or pseudoautosomal
Gene classified by Genomics England curator
Damian Smedley (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Added New Source
Ellen McDonagh (Genomics England Curator)PDZD7 was added to Congenital hearing impairment (Profound/Severe)panel. Sources: UKGTN,Emory Genetics Laboratory,Radboud University Medical Center, Nijmegen,Expert
Added New Source
Ellen McDonagh (Genomics England Curator)PDZD7 was added to Congenital hearing impairment (Profound/Severe)panel. Sources: UKGTN,Emory Genetics Laboratory,Radboud University Medical Center, Nijmegen,Expert
Added New Source
Ellen McDonagh (Genomics England Curator)PDZD7 was added to Congenital hearing impairment (Profound/Severe)panel. Sources: UKGTN,Emory Genetics Laboratory,Radboud University Medical Center, Nijmegen,Expert
Added New Source
Ellen McDonagh (Genomics England Curator)PDZD7 was added to Congenital hearing impairment (Profound/Severe)panel. Sources: UKGTN,Emory Genetics Laboratory,Radboud University Medical Center, Nijmegen,Expert