Infantile enterocolitis & monogenic inflammatory bowel disease
Gene: PI4KAEnsemblGeneIds (GRCh38): ENSG00000241973
EnsemblGeneIds (GRCh37): ENSG00000241973
OMIM: 600286, Gene2Phenotype
PI4KA is in 13 panels
1 review
Ivone Leong (Genomics England Curator)
This gene is rated Amber as not all affected individuals have IBD. Until more evidence is available this gene has been given an Amber rating.Created: 25 Oct 2021, 1:28 p.m. | Last Modified: 25 Oct 2021, 1:28 p.m.
Panel Version: 1.25
This gene is associated with a relevant phenotype in OMIM and Gene2Phenotype.
PMID: 25855803. From OMIM: "3 fetuses were all diagnosed in utero with multiple congenital anomalies resulting in the termination of pregnancy between 16 and 34 weeks' gestation. All fetuses had bilateral perisylvian polymicrogyria and cerebellar hypoplasia or dysplasia. One had a small pons. Additional features included severe talipes equinovarus, externally rotated hips, and variable contractures of the limbs or fingers."
PMID:34415322. 10 patients from 10 unrelated families with biallelic varaints in PI4KA. Patients showed a spectrum of severe global neurodevelopmental delay (8/10 moderate to severe ID), hypomyelination, cerebellar hyoplasia (1/10), cerebellar atrophy (5/10), bilateral perisylvian polymicrogyria (1/10), immunological problems (hypogammaglobulinaemia, lymphopaenia, and autoimmune neutorpaenia - 4/10), bowl dysfunction (4/10). Age of onset ranged from newborn to 17 years.
PMID: 34415310. 7 unrelated families. Family 1: Amish. Severe extensive multiple intestinal atresia, IBD and combined immunodeficiency (2/4). Families 3 - 8 all have 1 affected individual, (Turkish, Indian, German and Italian). Global developmental delay (all), ID (severe to mild), cerebellar and/or brainstem anomalies (3/6), spasticity (all), immature gyral pattern (1/6), leukodystrophy (6/6), multiple intestinal atresia (0/6), IBD (3/6), combined immunodeficiency (2/6). Early age of onset.Created: 1 Sep 2021, 1:47 p.m. | Last Modified: 25 Oct 2021, 1:28 p.m.
Panel Version: 1.25
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Amber
- Phenotypes
-
- Polymicrogyria, perisylvian, with cerebellar hypoplasia and arthrogryposis, OMIM:616531
- Tags
- OMIM
- 600286
- Clinvar variants
- Variants in PI4KA
- Penetrance
- None
- Publications
- Panels with this gene
-
- Hereditary ataxia with onset in adulthood
- White matter disorders and cerebral calcification - narrow panel
- Intellectual disability
- DDG2P
- Arthrogryposis
- Cerebellar hypoplasia
- Inherited white matter disorders
- Fetal anomalies
- Malformations of cortical development
- Infantile enterocolitis & monogenic inflammatory bowel disease
- Ataxia and cerebellar anomalies - narrow panel
- Primary immunodeficiency or monogenic inflammatory bowel disease
- Childhood onset hereditary spastic paraplegia
History Filter Activity
Added Tag
Ivone Leong (Genomics England Curator)Tag watchlist tag was added to gene: PI4KA.
Removed Tag
Ivone Leong (Genomics England Curator)Tag Q3_21_rating was removed from gene: PI4KA.
Created, Added New Source, Added Tag, Set mode of inheritance, Set publications, Set Phenotypes
Ivone Leong (Genomics England Curator)gene: PI4KA was added gene: PI4KA was added to Infantile enterocolitis & monogenic inflammatory bowel disease. Sources: Expert Review Amber Q3_21_rating tags were added to gene: PI4KA. Mode of inheritance for gene: PI4KA was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: PI4KA were set to 25855803; 34415322; 34415310 Phenotypes for gene: PI4KA were set to Polymicrogyria, perisylvian, with cerebellar hypoplasia and arthrogryposis, OMIM:616531