Congenital myopathy
Gene: VPS33BEnsemblGeneIds (GRCh38): ENSG00000184056
EnsemblGeneIds (GRCh37): ENSG00000184056
OMIM: 608552, Gene2Phenotype
VPS33B is in 18 panels
4 reviews
Louise Daugherty (Genomics England Curator)
Comment on list classification: Changed from Green to Red. Updated rating from Anna Sarkozy as a result of GLH Test Group prior to sign off- do NOT cause neuromuscular forms of arthrgrogryposisCreated: 3 Dec 2019, 3:23 p.m. | Last Modified: 3 Dec 2019, 3:23 p.m.
Panel Version: 1.203
Comment on list classification: Changed from Amber to Green. Gene referred to Genomics England clinical team due to review by the GMS Neurology specialist test group. It was agreed that as this represents a clinical continuum, we should represent the genes on both Congenital myopathy and Arthrogryposis panels as for Genomic Medicine Service it is possible that diagnoses could come from either route so we would not want to miss them. For the 100K Genomes Project participants we tended to apply both Congenital myopathy and Arthrogryposis panels, even though there was a more arbitrary line drawn between contractures / not for allocating genes to a particular panel. Appropriate phenotype, sufficient cases and external expert review all support gene-disease association and relevance to this panel to rate gene as Green.Created: 18 Oct 2019, 1:15 p.m. | Last Modified: 18 Oct 2019, 1:19 p.m.
Panel Version: 1.191
Gene rating and review submitted by Rachael Mein, Viapath Guy's Hospital February 2019 on on behalf of London South GLH for the GMS Neurology specialist test group.Created: 30 Apr 2019, 10:09 a.m.
Helen Brittain (Genomics England Curator)
Comment when marking as ready: Reviewer contacted to see if they have cases of myopathy, without arthrogryposis. If this is the case, it should be green on this panel. Otherwise leave as amber pending further phenotypic evidence, but green on arthrogryposis.Created: 7 Mar 2017, 4:37 p.m.
Comment on list classification: Arthrogryposis rather than myopathy. Green on arthrogryposis panel.Created: 7 Mar 2017, 4:35 p.m.
Anna Sarkozy (Great Ormond Street Hospital)
Phenotypes
vacuolar myopathy?
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Red
- NHS GMS
- London South GLH
- Phenotypes
-
- Arthrogryposis, renal dysfunction, and cholestasis 1, OMIM:208085
- OMIM
- 608552
- Clinvar variants
- Variants in VPS33B
- Penetrance
- Complete
- Publications
- Panels with this gene
-
- Congenital myopathy
- Arthrogryposis
- Inherited bleeding disorders
- Neonatal cholestasis
- Fetal anomalies
- Proteinuric renal disease
- Undiagnosed metabolic disorders
- Childhood onset dystonia, chorea or related movement disorder
- CAKUT
- Nephrocalcinosis or nephrolithiasis
- Cholestasis
- Palmoplantar keratodermas
- Unexplained kidney failure in young people
- Bleeding and platelet disorders
- DDG2P
- Renal tubulopathies
- Intellectual disability
- Likely inborn error of metabolism
History Filter Activity
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: VPS33B were changed from vacuolar myopathy; Arthrogryposis renal dysfunction, and cholestasis 1, 208085 to Arthrogryposis, renal dysfunction, and cholestasis 1, OMIM:208085
Entity classified by Genomics England curator
Louise Daugherty (Genomics England Curator)Gene: vps33b has been classified as Red List (Low Evidence).
Entity classified by Genomics England curator
Louise Daugherty (Genomics England Curator)Gene: vps33b has been classified as Green List (High Evidence).
Set publications
Louise Daugherty (Genomics England Curator)Publications for gene: VPS33B were set to
Set mode of inheritance
Louise Daugherty (Genomics England Curator)Mode of inheritance for gene: VPS33B was changed from to BIALLELIC, autosomal or pseudoautosomal
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for gene: VPS33B were changed from vacuolar myopathy? to vacuolar myopathy; Arthrogryposis renal dysfunction, and cholestasis 1, 208085
Added New Source
Louise Daugherty (Genomics England Curator)Source NHS GMS was added to VPS33B.
Added New Source
Louise Daugherty (Genomics England Curator)Source London South GLH was added to VPS33B.
Gene classified by Genomics England curator
Helen Brittain (Genomics England Curator)This gene has been classified as Amber List (Moderate Evidence).
Gene classified by Genomics England curator
Helen Brittain (Genomics England Curator)This gene has been classified as Amber List (Moderate Evidence).
Created
Anna Sarkozy (Great Ormond Street Hospital)VPS33B was created by anna.sarkozy
Added New Source
Anna Sarkozy (Great Ormond Street Hospital)VPS33B was added to Congenital myopathypanel. Sources: Expert Review