Cystic kidney disease
Gene: SEC63EnsemblGeneIds (GRCh38): ENSG00000025796
EnsemblGeneIds (GRCh37): ENSG00000025796
OMIM: 608648, Gene2Phenotype
SEC63 is in 6 panels
5 reviews
Arina Puzriakova (Genomics England Curator)
The rating of this gene has been updated to Green and the mode of inheritance set to 'MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted' following NHS Genomic Medicine Service approval.Created: 3 May 2024, 10:02 a.m. | Last Modified: 3 May 2024, 10:02 a.m.
Panel Version: 5.3
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Achchuthan Shanmugasundram (Genomics England Curator)
Comment on list classification: As reviewed by Ian Berry, this gene should be considered for green rating in this panel in the next GMS review as there are sufficient cases of polycystic liver disease 2 with both renal and hepatic cysts.Created: 19 Sep 2023, 8:39 p.m. | Last Modified: 19 Sep 2023, 8:39 p.m.
Panel Version: 4.15
A subset of patients (28-35%) may develop kidney cysts that are usually incidental findings and do not result in clinically significant renal disease (PMID:24886261)Created: 19 Sep 2023, 8:37 p.m. | Last Modified: 19 Sep 2023, 8:37 p.m.
Panel Version: 4.10
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Polycystic liver disease 2 with or without kidney cysts, OMIM:617004
Publications
Ian Berry (Leeds Genetics Laboratory)
Phenotype is predominantly hepatic but can involve renal cysts.
We have seen 2x patients with pathogenic findings in this gene through R193 referrals therefore it makes sense to be on this panel. R193 referrals frequently have both renal & hepatic cysts.
OMIM disorder name is polycystic liver disease-2 with or without kidney cysts (PCLD2)Created: 1 Sep 2023, 1:46 p.m. | Last Modified: 1 Sep 2023, 1:47 p.m.
Panel Version: 4.6
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Miranda Durkie (Genetics)
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Publications
Variants in this GENE are reported as part of current diagnostic practice
Ellen Thomas (Genomics England Curator)
Comment on list classification: Polycystic liver disease, not kidneys.Created: 10 May 2016, 12:39 p.m.
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- NHS GMS
- Expert Review Green
- Expert
- Phenotypes
-
- Polycystic liver disease 2 with or without kidney cysts, OMIM:617004
- OMIM
- 608648
- Clinvar variants
- Variants in SEC63
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
Removed Tag, Removed Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag Q3_23_promote_green was removed from gene: SEC63. Tag Q3_23_NHS_review was removed from gene: SEC63.
Added New Source, Added New Source, Status Update
Achchuthan Shanmugasundram (Genomics England Curator)Source Expert Review Green was added to SEC63. Source NHS GMS was added to SEC63. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Added Tag, Added Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag Q3_23_promote_green tag was added to gene: SEC63. Tag Q3_23_NHS_review tag was added to gene: SEC63.
Entity classified by Genomics England curator
Achchuthan Shanmugasundram (Genomics England Curator)Gene: sec63 has been classified as Amber List (Moderate Evidence).
Set publications
Achchuthan Shanmugasundram (Genomics England Curator)Publications for gene: SEC63 were set to 15133510,
Set publications
Achchuthan Shanmugasundram (Genomics England Curator)Publications for gene: SEC63 were set to
Set Phenotypes
Achchuthan Shanmugasundram (Genomics England Curator)Phenotypes for gene: SEC63 were changed from to Polycystic liver disease 2 with or without kidney cysts, OMIM:617004
Set mode of inheritance
Achchuthan Shanmugasundram (Genomics England Curator)Mode of inheritance for gene: SEC63 was changed from BIALLELIC, autosomal or pseudoautosomal to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Gene classified by Genomics England curator
Ellen Thomas (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Gene classified by Genomics England curator
Ellen Thomas (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Added New Source
Ellen McDonagh (Genomics England Curator)SEC63 was added to Cystic kidney diseasepanel. Sources: Expert